Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0877 ATGAATATCAAAGTTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTGGTGTTCTTGCAGTTTGGGCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTGAATCAAGGAATGAGCAACTATGTTCTTGTTGTTTACCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCATTGATTTTTGACAAGAAGGTGAGACCAAAGATGACAATTCCAGTCTTTGCCAAGTTAATGCTGCTCAGCTTGCTAGAACCTGTGATTGATCAGAACTTATATTTCATGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATGTTCTCCCTGCCATTACCTTTGTGATGGCTTGGATCCTCAGGCTTGAGAGGGTAAAAATCAAAAGCATCAGAAGCCAAGCCAAGTTGATAGGAACCATAGCAACAGTTGGAGGAGCTATGATAATGACACTGCTAAAAGGCCCAATTGTGGAGCTATTTTGGGTGAAAGAGAGAGCAAATCATGAACAACAAAGGGGTGAAATCAGCCTTGAACATACAATCAAAGGTTCAATTATGATAACAATTGGGTGTTTCAGCTGGGCCTGCTTCATGATTCTTCAGGCAATAACTTTGAAAGCTTACCCAGCAGAGCTTTCTCTTACGGCTTGGATCTGCCTTTTGGGCACGGCGGAGGGCACGGTGTTGGCTTTGGTGATGGAAAGAGGAAATGCCGCCGTTTGGTCCATTTCTTGGGGAACTAAATTGCTCGCCGCCGTTTATAGTGGAATATTTTGTTCAGGACTTGCTTATTATATTCAAGGATTAGTGATGAAAGACAAAGGACCTGTGTTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTGGCCGTTATGAGTTCATTTATCTTGGGCGAACGTCTTTATTTTGGAAGGGTACTTGGAGCTGTTGTAATAATTGTGGGGTTATACCTTGTTGTTTGGGGCAAAAACAAAGATGGGAATCCCTCAAGTGAAGACCTGAAATTGCCCACCAAACAAACAAGAGAAATAGAAGACAACAAGATGGAAAGTTTAACAATTGAGGCTTCTAAGACTAATTGTGTTGATCTAAAGAATGAGCAAAAGTAG 1128 42.2 MNIKVSQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLMLLSLLEPVIDQNLYFMGMKYTTATFAAAMCNVLPAITFVMAWILRLERVKIKSIRSQAKLIGTIATVGGAMIMTLLKGPIVELFWVKERANHEQQRGEISLEHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSISWGTKLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAVMSSFILGERLYFGRVLGAVVIIVGLYLVVWGKNKDGNPSSEDLKLPTKQTREIEDNKMESLTIEASKTNCVDLKNEQK 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 63079465 63083204 + Hsped.04g08770.1 Hepe04g0877 568015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0877 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Hepe04g0877 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Hepe04g0877 375 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Hepe04g0877 375 Pfam EamA-like transporter family 23 154 IPR000620 GO:0016020(InterPro)
Hepe04g0877 375 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2285 Hepe-Chr2:65998910 Hepe04g0877 Hepe-Chr4:63079465 4.74e-105 dispersed
Hepe02g2286 Hepe-Chr2:66020728 Hepe04g0877 Hepe-Chr4:63079465 1.53e-104 dispersed
Hepe02g3014 Hepe-Chr2:79303343 Hepe04g0877 Hepe-Chr4:63079465 3.58e-101 dispersed
Hepe04g0525 Hepe-Chr4:57940368 Hepe04g0877 Hepe-Chr4:63079465 1.28e-111 dispersed
Hepe04g0877 Hepe-Chr4:63079465 Hepe05g0662 Hepe-Chr5:10907759 1.56e-117 dispersed
Hepe01g0808 Hepe-Chr1:71931813 Hepe04g0877 Hepe-Chr4:63079465 8.97e-133 transposed
Hepe02g3012 Hepe-Chr2:79260776 Hepe04g0877 Hepe-Chr4:63079465 2.40e-123 wgd
Hepe04g0877 Hepe-Chr4:63079465 Hepe04g1132 Hepe-Chr4:66376667 1.63e-53 wgd
Hepe04g0877 Hepe-Chr4:63079465 Hepe09g0531 Hepe-Chr9:5017956 1.97e-49 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0877 - - - 0.0