Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g0907 | ATGAGTGCTAATGCTAACAGGCACAGGGGGTTAAGAGAACTAAGTCACCACCACCCACAGGATTGGAATGGAAGCGTGAACGGTGGTGTATCTGGCCGGGAACAGAGCCCCGTTCAGGAAAATGAGTTGAAGGTCAATAGATTAACTAGAAATGTAGAAGATGGTCGAAGACCTACTGTTCAAGCTCAGGACATTCTGCAAATACAACAGCAGCAGCAGCCTCAAGGATCTATGGTCTGCTGGGAGAGATTTCTACATCTTAGGTCCCTCAAGGTTTTGCTTGTAGAAAACGATGACTCCACACGGCATCTGGTCACTGCACTGCTTCGTAATTGCAGTTATGAAGTTATTGCGGCTGCAAATGGACTACACGCATGGAAGATGCTAGAAGATCTGACAAATCACATAGATATTGTCTTAACAGAGGTGGTCATGCCTTGCTTATCTGGCATTGGTCTTTTAAGCAAGATTATGAGCCATCAAACAAGGAAGAATATACCTGTAATCATGATGTCTTCTCATGACTCAATGGGTGTAGTCTTCAAATGTTTGTCAAAGGGTGCTGTCGATTTTTTAGTGAAGCCCATTCGGAAGAATGAGCTTAAAAACCTTTGGCAACATGTTTGGAGAAGATGCCATAGCTCTAGCGGTAGTGGAAGTGAAAGTGGCACACAGACACAAAAATCTGTGAAGTCAAAAAGTGTTGAAAAATCAGACAACAACACGGGGAGCAATGATGAAGAAGAAGACAGTGAGAGCATTGGTTTCAGTATTGGAGATGGAAGTGACGACGGTAGTGGCACACAGAGTTCTTGGACCAAGCAAGCTATAGAAGTTGAAAGCCCTCGACCAGTATCTGCATCAGCATGGGATCAAAAGCGTGAACGTGCTGATAGTACTTGTGCTCAAGTTGTCCACTCAAATGCATCAGCATTTGCTAATAATGTGCCACCTGTTTTGACAGCAGAGTGCCTGGTGCAGAGAAAGCAACTTGAAACTGTTACCATGGGTAAAGTTGAATTAGACGTGCACAGAAATCTAGATTTACAACTTGAACTCTCTACGGAACACCCAACCCAGCTAGTTAACAGAAAACATAATGTTATGCTTGAAATAGTGTCCAGTGGATTTAATGAGCAGTTCAACAAAGGATATATTGACCTCAACTCTGAGAGCCCATCCAGCAAATTTAAGTACGAACAAACATCTGTTACTGGTCTTGCTACCAATCTTACTGATTCTAAGATGGATGTCACTGTGTTTGAGGCACCAAGCAGCCATCCCAAGATCACAGACATTAAGAATAAAGATGTTACAGACTCAGAAAAATTTCCATCCCTTGAGCTTGGATTAAAAAGGCGTAGAGGAGTTCAAACGACAGGGAAAGCAGTCCAAGATGAGCGGAATGTTTTGAGACGCTCAGATTCTTCAGCTTTTTCTAGGTACAATGCTGGCTCAAATTCTACCAAGACTCCAACTGGGAATGCCAGAAGTAACTCTCCGCCTGTTAATTGCTTAGAAGTTGCAAACCAAGAGAACATGCAAGATTTTCGATCTCATTCAAGTAGTAATCCTCCCAACCAATGCTCAAATGGAGATAGCAATAATATTGACATGGGTTCCACTACCAATAATACATTTTCCAAGTCCATAGTTACTAATAACAAGTCAGCAATGACATCAACAGTCAACTATTTGCACCCGTTGGCAGCATTCCAACCTGTTAAGAATGACAGTTTATCTGTTCCTCAGCAAGCTGATAATGTCAATAATGTTACATTTGCAACAATGCAAGCTCAGTCTAATTGTGTGCACAGGGAATCTCAAATCCAGCAACTTTGTCACCCATACAATCACACTCATCAGCTTGCCCACAATATTCAACACGTGTCATCTGAGCACAATGATTTTCCATTAAAGAAAATATCTGCAGCTGCCACGCATTGTGGGTCAACCAATGTGTTAAATGGCCATGTAGAAGGTAATGCAGCAAATTATAGTGTGAACGGTAGCGCCTCGGGCAGTAACCATGGAAGCAATGGCCAAAATGGGAGCAGCACTGCAGTAAATGCTGGAGGGCTGAATATGAATATGGAAAGTGATAATGGAATAGGTCGGAAAAGCCGAAGTGGGGATGCCAGTGGGAGTGGGAGTGGGAGTGGAAGTGGAAGTGGAAACAAAATGGACCAAGACAGAGTTTCACAAAGGGAAGCTGCCTTGACAAAGTTTCGCCAGAAAAGGAAGGAAAGATGCTTCCGTAAAAAGGTCCGATATCAAAGCAGAAAGAGATTAGCAGAACAGAGACCCCGTGTTCGGGGACAGTTCGTGAGACAAAACACAAGCGAAAACACAAGCAATGCGGGAGATGGCTAA | 2373 | 43.15 | MSANANRHRGLRELSHHHPQDWNGSVNGGVSGREQSPVQENELKVNRLTRNVEDGRRPTVQAQDILQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDIVLTEVVMPCLSGIGLLSKIMSHQTRKNIPVIMMSSHDSMGVVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDEEEDSESIGFSIGDGSDDGSGTQSSWTKQAIEVESPRPVSASAWDQKRERADSTCAQVVHSNASAFANNVPPVLTAECLVQRKQLETVTMGKVELDVHRNLDLQLELSTEHPTQLVNRKHNVMLEIVSSGFNEQFNKGYIDLNSESPSSKFKYEQTSVTGLATNLTDSKMDVTVFEAPSSHPKITDIKNKDVTDSEKFPSLELGLKRRRGVQTTGKAVQDERNVLRRSDSSAFSRYNAGSNSTKTPTGNARSNSPPVNCLEVANQENMQDFRSHSSSNPPNQCSNGDSNNIDMGSTTNNTFSKSIVTNNKSAMTSTVNYLHPLAAFQPVKNDSLSVPQQADNVNNVTFATMQAQSNCVHRESQIQQLCHPYNHTHQLAHNIQHVSSEHNDFPLKKISAAATHCGSTNVLNGHVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNAGGLNMNMESDNGIGRKSRSGDASGSGSGSGSGSGNKMDQDRVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSENTSNAGDG | 790 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 63332278 | 63339744 | - | Hsped.04g09070.1 | Hepe04g0907 | 568045 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 515 | 542 | - | - | |
Hepe04g0907 | 790 | CDD | psREC_PRR | 92 | 195 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 20 | 44 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 262 | 277 | - | - | |
Hepe04g0907 | 790 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 76 | 325 | IPR045279 | GO:0009736(InterPro) | |
Hepe04g0907 | 790 | Pfam | Response regulator receiver domain | 92 | 203 | IPR001789 | GO:0000160(InterPro) | |
Hepe04g0907 | 790 | ProSiteProfiles | CCT domain profile. | 736 | 778 | IPR010402 | GO:0005515(InterPro) | |
Hepe04g0907 | 790 | SMART | REC_2 | 90 | 205 | IPR001789 | GO:0000160(InterPro) | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Hepe04g0907 | 790 | SUPERFAMILY | CheY-like | 88 | 214 | IPR011006 | - | |
Hepe04g0907 | 790 | FunFam | Two-component response regulator-like PRR37 | 90 | 248 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 214 | 231 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 670 | 729 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 458 | 503 | - | - | |
Hepe04g0907 | 790 | Pfam | CCT motif | 736 | 778 | IPR010402 | GO:0005515(InterPro) | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 475 | 503 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 214 | 294 | - | - | |
Hepe04g0907 | 790 | Gene3D | - | 89 | 315 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 670 | 790 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 746 | 761 | - | - | |
Hepe04g0907 | 790 | ProSiteProfiles | Response regulatory domain profile. | 91 | 209 | IPR001789 | GO:0000160(InterPro) | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 730 | 745 | - | - | |
Hepe04g0907 | 790 | MobiDBLite | consensus disorder prediction | 773 | 790 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g0907 | Hepe-Chr4:63332278 | Hepe09g0102 | Hepe-Chr9:826206 | 1.04e-23 | dispersed | |
Hepe10g0438 | Hepe-Chr10:4941738 | Hepe04g0907 | Hepe-Chr4:63332278 | 2.84e-06 | dispersed | |
Hepe10g0439 | Hepe-Chr10:4953485 | Hepe04g0907 | Hepe-Chr4:63332278 | 1.34e-06 | dispersed | |
Hepe06g0835 | Hepe-Chr6:55125390 | Hepe04g0907 | Hepe-Chr4:63332278 | 4.76e-40 | transposed | |
Hepe02g0710 | Hepe-Chr2:7787619 | Hepe04g0907 | Hepe-Chr4:63332278 | 4.85e-07 | transposed | |
Hepe04g0907 | Hepe-Chr4:63332278 | Hepe09g0490 | Hepe-Chr9:4561601 | 1.52e-13 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55388 | PF00072 | Response_reg | 5.60E-21 | CL0304 | Hepe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g0907 | K12129 | - | csv:101210765 | 1246.49 |