Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0907 ATGAGTGCTAATGCTAACAGGCACAGGGGGTTAAGAGAACTAAGTCACCACCACCCACAGGATTGGAATGGAAGCGTGAACGGTGGTGTATCTGGCCGGGAACAGAGCCCCGTTCAGGAAAATGAGTTGAAGGTCAATAGATTAACTAGAAATGTAGAAGATGGTCGAAGACCTACTGTTCAAGCTCAGGACATTCTGCAAATACAACAGCAGCAGCAGCCTCAAGGATCTATGGTCTGCTGGGAGAGATTTCTACATCTTAGGTCCCTCAAGGTTTTGCTTGTAGAAAACGATGACTCCACACGGCATCTGGTCACTGCACTGCTTCGTAATTGCAGTTATGAAGTTATTGCGGCTGCAAATGGACTACACGCATGGAAGATGCTAGAAGATCTGACAAATCACATAGATATTGTCTTAACAGAGGTGGTCATGCCTTGCTTATCTGGCATTGGTCTTTTAAGCAAGATTATGAGCCATCAAACAAGGAAGAATATACCTGTAATCATGATGTCTTCTCATGACTCAATGGGTGTAGTCTTCAAATGTTTGTCAAAGGGTGCTGTCGATTTTTTAGTGAAGCCCATTCGGAAGAATGAGCTTAAAAACCTTTGGCAACATGTTTGGAGAAGATGCCATAGCTCTAGCGGTAGTGGAAGTGAAAGTGGCACACAGACACAAAAATCTGTGAAGTCAAAAAGTGTTGAAAAATCAGACAACAACACGGGGAGCAATGATGAAGAAGAAGACAGTGAGAGCATTGGTTTCAGTATTGGAGATGGAAGTGACGACGGTAGTGGCACACAGAGTTCTTGGACCAAGCAAGCTATAGAAGTTGAAAGCCCTCGACCAGTATCTGCATCAGCATGGGATCAAAAGCGTGAACGTGCTGATAGTACTTGTGCTCAAGTTGTCCACTCAAATGCATCAGCATTTGCTAATAATGTGCCACCTGTTTTGACAGCAGAGTGCCTGGTGCAGAGAAAGCAACTTGAAACTGTTACCATGGGTAAAGTTGAATTAGACGTGCACAGAAATCTAGATTTACAACTTGAACTCTCTACGGAACACCCAACCCAGCTAGTTAACAGAAAACATAATGTTATGCTTGAAATAGTGTCCAGTGGATTTAATGAGCAGTTCAACAAAGGATATATTGACCTCAACTCTGAGAGCCCATCCAGCAAATTTAAGTACGAACAAACATCTGTTACTGGTCTTGCTACCAATCTTACTGATTCTAAGATGGATGTCACTGTGTTTGAGGCACCAAGCAGCCATCCCAAGATCACAGACATTAAGAATAAAGATGTTACAGACTCAGAAAAATTTCCATCCCTTGAGCTTGGATTAAAAAGGCGTAGAGGAGTTCAAACGACAGGGAAAGCAGTCCAAGATGAGCGGAATGTTTTGAGACGCTCAGATTCTTCAGCTTTTTCTAGGTACAATGCTGGCTCAAATTCTACCAAGACTCCAACTGGGAATGCCAGAAGTAACTCTCCGCCTGTTAATTGCTTAGAAGTTGCAAACCAAGAGAACATGCAAGATTTTCGATCTCATTCAAGTAGTAATCCTCCCAACCAATGCTCAAATGGAGATAGCAATAATATTGACATGGGTTCCACTACCAATAATACATTTTCCAAGTCCATAGTTACTAATAACAAGTCAGCAATGACATCAACAGTCAACTATTTGCACCCGTTGGCAGCATTCCAACCTGTTAAGAATGACAGTTTATCTGTTCCTCAGCAAGCTGATAATGTCAATAATGTTACATTTGCAACAATGCAAGCTCAGTCTAATTGTGTGCACAGGGAATCTCAAATCCAGCAACTTTGTCACCCATACAATCACACTCATCAGCTTGCCCACAATATTCAACACGTGTCATCTGAGCACAATGATTTTCCATTAAAGAAAATATCTGCAGCTGCCACGCATTGTGGGTCAACCAATGTGTTAAATGGCCATGTAGAAGGTAATGCAGCAAATTATAGTGTGAACGGTAGCGCCTCGGGCAGTAACCATGGAAGCAATGGCCAAAATGGGAGCAGCACTGCAGTAAATGCTGGAGGGCTGAATATGAATATGGAAAGTGATAATGGAATAGGTCGGAAAAGCCGAAGTGGGGATGCCAGTGGGAGTGGGAGTGGGAGTGGAAGTGGAAGTGGAAACAAAATGGACCAAGACAGAGTTTCACAAAGGGAAGCTGCCTTGACAAAGTTTCGCCAGAAAAGGAAGGAAAGATGCTTCCGTAAAAAGGTCCGATATCAAAGCAGAAAGAGATTAGCAGAACAGAGACCCCGTGTTCGGGGACAGTTCGTGAGACAAAACACAAGCGAAAACACAAGCAATGCGGGAGATGGCTAA 2373 43.15 MSANANRHRGLRELSHHHPQDWNGSVNGGVSGREQSPVQENELKVNRLTRNVEDGRRPTVQAQDILQIQQQQQPQGSMVCWERFLHLRSLKVLLVENDDSTRHLVTALLRNCSYEVIAAANGLHAWKMLEDLTNHIDIVLTEVVMPCLSGIGLLSKIMSHQTRKNIPVIMMSSHDSMGVVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNTGSNDEEEDSESIGFSIGDGSDDGSGTQSSWTKQAIEVESPRPVSASAWDQKRERADSTCAQVVHSNASAFANNVPPVLTAECLVQRKQLETVTMGKVELDVHRNLDLQLELSTEHPTQLVNRKHNVMLEIVSSGFNEQFNKGYIDLNSESPSSKFKYEQTSVTGLATNLTDSKMDVTVFEAPSSHPKITDIKNKDVTDSEKFPSLELGLKRRRGVQTTGKAVQDERNVLRRSDSSAFSRYNAGSNSTKTPTGNARSNSPPVNCLEVANQENMQDFRSHSSSNPPNQCSNGDSNNIDMGSTTNNTFSKSIVTNNKSAMTSTVNYLHPLAAFQPVKNDSLSVPQQADNVNNVTFATMQAQSNCVHRESQIQQLCHPYNHTHQLAHNIQHVSSEHNDFPLKKISAAATHCGSTNVLNGHVEGNAANYSVNGSASGSNHGSNGQNGSSTAVNAGGLNMNMESDNGIGRKSRSGDASGSGSGSGSGSGNKMDQDRVSQREAALTKFRQKRKERCFRKKVRYQSRKRLAEQRPRVRGQFVRQNTSENTSNAGDG 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 63332278 63339744 - Hsped.04g09070.1 Hepe04g0907 568045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0907 790 MobiDBLite consensus disorder prediction 515 542 - -
Hepe04g0907 790 CDD psREC_PRR 92 195 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 20 44 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 262 277 - -
Hepe04g0907 790 PANTHER TWO-COMPONENT RESPONSE REGULATOR 76 325 IPR045279 GO:0009736(InterPro)
Hepe04g0907 790 Pfam Response regulator receiver domain 92 203 IPR001789 GO:0000160(InterPro)
Hepe04g0907 790 ProSiteProfiles CCT domain profile. 736 778 IPR010402 GO:0005515(InterPro)
Hepe04g0907 790 SMART REC_2 90 205 IPR001789 GO:0000160(InterPro)
Hepe04g0907 790 MobiDBLite consensus disorder prediction 1 44 - -
Hepe04g0907 790 SUPERFAMILY CheY-like 88 214 IPR011006 -
Hepe04g0907 790 FunFam Two-component response regulator-like PRR37 90 248 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 214 231 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 670 729 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 458 503 - -
Hepe04g0907 790 Pfam CCT motif 736 778 IPR010402 GO:0005515(InterPro)
Hepe04g0907 790 MobiDBLite consensus disorder prediction 475 503 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 214 294 - -
Hepe04g0907 790 Gene3D - 89 315 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 670 790 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 746 761 - -
Hepe04g0907 790 ProSiteProfiles Response regulatory domain profile. 91 209 IPR001789 GO:0000160(InterPro)
Hepe04g0907 790 MobiDBLite consensus disorder prediction 730 745 - -
Hepe04g0907 790 MobiDBLite consensus disorder prediction 773 790 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0907 Hepe-Chr4:63332278 Hepe09g0102 Hepe-Chr9:826206 1.04e-23 dispersed
Hepe10g0438 Hepe-Chr10:4941738 Hepe04g0907 Hepe-Chr4:63332278 2.84e-06 dispersed
Hepe10g0439 Hepe-Chr10:4953485 Hepe04g0907 Hepe-Chr4:63332278 1.34e-06 dispersed
Hepe06g0835 Hepe-Chr6:55125390 Hepe04g0907 Hepe-Chr4:63332278 4.76e-40 transposed
Hepe02g0710 Hepe-Chr2:7787619 Hepe04g0907 Hepe-Chr4:63332278 4.85e-07 transposed
Hepe04g0907 Hepe-Chr4:63332278 Hepe09g0490 Hepe-Chr9:4561601 1.52e-13 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55388 PF00072 Response_reg 5.60E-21 CL0304 Hepe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0907 K12129 - csv:101210765 1246.49