Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g0919 | ATGGCATGGAAGAGCCAACAACAGCAACTGATTGTAAATTACTATAATCAAAGTTGTCCAAATGCAGAAGACATAATCAAACAGCAAGTTTTCTCCATATACAAAAAGCATGGTAACTCAGCCATTTCATGGATTAGAAATCTCTTCCATGATTGCATGGTCAAGTCCTGTGATGCATCTCTGTTGCTAAAGATGGAAACGAATGGAGGTGTAATTTTAGGGGGAGCAGAAATTGAAATGAAAACAGGAAGAAGAGATAGCAAAGAAAGTTATGAAGCAATGGTGGAAGAATTCATTCCAAATCACAATGACTCTCTTTCATTGGTTCTTTCTCGATTTGAAGATATTGGCATTGATGCTGAAGCTACCGTTGCTCTTTTAGGAGCTCACTCAGTGGGTCGGGTTCACTGTGTAAATATAGTGAACCGGCTGTACCCGACGGTGGACCCGACGTTGGATCCGGATCATGCAGCCTATCTAAAACACAGGTGCCCGAACCCGAACCCGGACCCGAAGGCGGTCCAATACGCGAAAAACGATCTGGAAAGCCCGATGGTATTGGACAACAACTACTACAAAAACGTATTGGGCCATAAGGCCCTTTTGTTGGTGGACCATCAATTGGGCTCAAGCCCAATAACTCTTCCTTATGTCCAATACATGGCCTCCAATAACAGCTACTTTCTGGCCCAATTTGCTAGGGCTGTGCTTTTGTTGTCTGAGAATAGCCCTCTCACCGATGAAGAAGGAGAGATTAGAATTGATTGTCGACGTGTCAATTAA | 783 | 43.42 | MAWKSQQQQLIVNYYNQSCPNAEDIIKQQVFSIYKKHGNSAISWIRNLFHDCMVKSCDASLLLKMETNGGVILGGAEIEMKTGRRDSKESYEAMVEEFIPNHNDSLSLVLSRFEDIGIDAEATVALLGAHSVGRVHCVNIVNRLYPTVDPTLDPDHAAYLKHRCPNPNPDPKAVQYAKNDLESPMVLDNNYYKNVLGHKALLLVDHQLGSSPITLPYVQYMASNNSYFLAQFARAVLLLSENSPLTDEEGEIRIDCRRVN | 260 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 63480861 | 63488934 | - | Hsped.04g09190.1 | Hepe04g0919 | 568057 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g0919 | 260 | Pfam | Peroxidase | 27 | 64 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | Pfam | Peroxidase | 73 | 224 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | PANTHER | - | 5 | 67 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | Gene3D | - | 71 | 260 | - | - | |
| Hepe04g0919 | 260 | Gene3D | Peroxidase, domain 2 | 100 | 239 | - | - | |
| Hepe04g0919 | 260 | Gene3D | - | 10 | 68 | - | - | |
| Hepe04g0919 | 260 | SUPERFAMILY | Heme-dependent peroxidases | 9 | 260 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | PRINTS | Haem peroxidase superfamily signature | 41 | 55 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | PRINTS | Haem peroxidase superfamily signature | 122 | 137 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | PRINTS | Haem peroxidase superfamily signature | 180 | 195 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | PRINTS | Plant peroxidase signature | 19 | 38 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | PRINTS | Plant peroxidase signature | 43 | 63 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | ProSiteProfiles | Plant heme peroxidase family profile. | 9 | 260 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Hepe04g0919 | 260 | FunFam | Peroxidase | 100 | 239 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g0919 | Hepe-Chr4:63480861 | Hepe07g2034 | Hepe-Chr7:64542245 | 3.63e-96 | dispersed | |
| Hepe04g0919 | Hepe-Chr4:63480861 | Hepe05g0248 | Hepe-Chr5:2926138 | 3.89e-97 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g0919 | K00430 | - | csv:101221151 | 432.95 |