Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0933 ATGTCGGCCTGCAAGGACTACCATGACCCGCCTCCCGCCCCATTGATCGACGCCGATGAGTTCACTCAGTGGTCATTTTACAGAGCCATCATCGCCGAGTTCGTTGCCACGCTTTTGTTCTTGTACATTCTTGTTCTCACTGTCATTGGCTATTCCAGCCAGTCCGATGACAGCCGCGGCGGTAATGTCTGCGGCGGCGTCGGCATTTTGGGCATTGCCTGGGCAGTTGGCGGCATGATCTTCGTCCTCGTTTACTGCACCGCTGGAATTTCTGGAGGGCATATTAACCCGGCGGTGACATTCGGGCTGTTATTAGCTCGAAAAATCTCGCTAATCAGAGCAGTATTTTACATTATAGCTCAATGTTTGGGAGCCATTTGTGGGTGTGCATTAGCTAAATCATTTCAGAAGGCTTATTACGTTCGGTATGGTGGTGGAGTCAATATGCTCTCCGATGGGTACAGCATCGGCACCGGGTTAGCCGCAGAGATCATCGGAACTTTTGTTCTTGTTTACACTGTCTTCTCCGCCACCGATCCCAAGAGAAACGCTAGAGATTCTCACGTCCCTGTAAGTTCAAAACCCAAATTGGGTTTAGTTTAG 603 50.08 MSACKDYHDPPPAPLIDADEFTQWSFYRAIIAEFVATLLFLYILVLTVIGYSSQSDDSRGGNVCGGVGILGIAWAVGGMIFVLVYCTAGISGGHINPAVTFGLLLARKISLIRAVFYIIAQCLGAICGCALAKSFQKAYYVRYGGGVNMLSDGYSIGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVSSKPKLGLV 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 63602108 63603700 + Hsped.04g09330.1 Hepe04g0933 568071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0933 200 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 3 194 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Hepe04g0933 200 SUPERFAMILY Aquaporin-like 20 190 IPR023271 -
Hepe04g0933 200 Pfam Major intrinsic protein 20 190 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0933 200 Gene3D Glycerol uptake facilitator protein. 13 200 IPR023271 -
Hepe04g0933 200 MobiDBLite consensus disorder prediction 181 200 - -
Hepe04g0933 200 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0933 200 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0933 200 PRINTS Major intrinsic protein family signature 162 180 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0933 200 PRINTS Major intrinsic protein family signature 28 47 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0933 200 ProSitePatterns MIP family signature. 94 102 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0933 Hepe-Chr4:63602108 Hepe08g0886 Hepe-Chr8:8024237 4.64e-106 dispersed
Hepe04g0932 Hepe-Chr4:63598978 Hepe04g0933 Hepe-Chr4:63602108 5.86e-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0933 K09872 - csv:101214884 331.257