Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g0933 | ATGTCGGCCTGCAAGGACTACCATGACCCGCCTCCCGCCCCATTGATCGACGCCGATGAGTTCACTCAGTGGTCATTTTACAGAGCCATCATCGCCGAGTTCGTTGCCACGCTTTTGTTCTTGTACATTCTTGTTCTCACTGTCATTGGCTATTCCAGCCAGTCCGATGACAGCCGCGGCGGTAATGTCTGCGGCGGCGTCGGCATTTTGGGCATTGCCTGGGCAGTTGGCGGCATGATCTTCGTCCTCGTTTACTGCACCGCTGGAATTTCTGGAGGGCATATTAACCCGGCGGTGACATTCGGGCTGTTATTAGCTCGAAAAATCTCGCTAATCAGAGCAGTATTTTACATTATAGCTCAATGTTTGGGAGCCATTTGTGGGTGTGCATTAGCTAAATCATTTCAGAAGGCTTATTACGTTCGGTATGGTGGTGGAGTCAATATGCTCTCCGATGGGTACAGCATCGGCACCGGGTTAGCCGCAGAGATCATCGGAACTTTTGTTCTTGTTTACACTGTCTTCTCCGCCACCGATCCCAAGAGAAACGCTAGAGATTCTCACGTCCCTGTAAGTTCAAAACCCAAATTGGGTTTAGTTTAG | 603 | 50.08 | MSACKDYHDPPPAPLIDADEFTQWSFYRAIIAEFVATLLFLYILVLTVIGYSSQSDDSRGGNVCGGVGILGIAWAVGGMIFVLVYCTAGISGGHINPAVTFGLLLARKISLIRAVFYIIAQCLGAICGCALAKSFQKAYYVRYGGGVNMLSDGYSIGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVSSKPKLGLV | 200 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 63602108 | 63603700 | + | Hsped.04g09330.1 | Hepe04g0933 | 568071 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g0933 | 200 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 3 | 194 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Hepe04g0933 | 200 | SUPERFAMILY | Aquaporin-like | 20 | 190 | IPR023271 | - | |
Hepe04g0933 | 200 | Pfam | Major intrinsic protein | 20 | 190 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe04g0933 | 200 | Gene3D | Glycerol uptake facilitator protein. | 13 | 200 | IPR023271 | - | |
Hepe04g0933 | 200 | MobiDBLite | consensus disorder prediction | 181 | 200 | - | - | |
Hepe04g0933 | 200 | PRINTS | Major intrinsic protein family signature | 113 | 132 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe04g0933 | 200 | PRINTS | Major intrinsic protein family signature | 76 | 100 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe04g0933 | 200 | PRINTS | Major intrinsic protein family signature | 162 | 180 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe04g0933 | 200 | PRINTS | Major intrinsic protein family signature | 28 | 47 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Hepe04g0933 | 200 | ProSitePatterns | MIP family signature. | 94 | 102 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g0933 | Hepe-Chr4:63602108 | Hepe08g0886 | Hepe-Chr8:8024237 | 4.64e-106 | dispersed | |
Hepe04g0932 | Hepe-Chr4:63598978 | Hepe04g0933 | Hepe-Chr4:63602108 | 5.86e-116 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g0933 | K09872 | - | csv:101214884 | 331.257 |