Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0941 ATGACGCCGGAGTGGGAGATGATGAGGAGAAATAAGAGAGGGAAGAAAAAGAAAGAAGTAGCGGGAGAATCATCATCTCGAGTGTTTTCAGAGGATTATGATCATGTGGTGGATCGAATGGTAGTAGATCCAAGGCTTCCCATATTGAACAGATGGAACAGGGTTTTTTTGGTGGCGTGTTTGGTGTCGCTATTTGTGGACCCAATGTTCTTTTATCTGCCGGTGGTGAAGGTGGCGGAGGGGTGCGTTGAAATGAGCGGAGGGCTCGGGGTGGCGCTGACGGTGGTTCGATCAATGGCTGATGCGTTCTACATAACCCAGATAGTGGTCAAGTTTAGGACGGCTTATGTAGCACCCTCGTCCAGGATCTTTGGAAGAGGAGAGCTCGTGATTGATCCTTCTAAGATTGCTTCTAATTATCTTGTTTTCGACTTTTGGCTTGATTTTGCTGCTGCATTGCCTCTTCCACAGGCATTCATATGGGTTGCAATCCCAAACATTAGGGGTTCAAACATAACCCCATGGAGTTACTTTCTTCGCTTCTCCATCCTTTTCCAATACTTTTTGAGGCTCTATCTCATCTTTCCTCTCTCTGATCAAATCATTAAAGCCACTGGAGTTTTGATGAAAACAGCCTGGGCTGGAGCTGTTTATAACCTAATGCTCTTTATGCTAGCAAGCCACGTTTTGGGGTCGTGTTGGTACCTTTTATCGATAGGACGACAAATGGAATGCTGGAAAAAAGTTTGCAAATTGGGGCAGTTGGATTGCAAATATGAGTATTTTGATTGTAAAGCTGTGGGAAATCCAAGTAGAGGTGCTTGGTTTGAAGCAACCAATATTTCAAAGCTATGTCATCCAACTGCCACCACTTTCTTCCATTTTGGGATCTTTTCTGATTCTTTTGCCTCTACTCATTCTTCCACCTTCTTCAATAGGTTCTTCTATTGTTTTTGGTGGGGCTTGAGGAATTTAAGCTCTCTAGGGCAAAATTTGGTAACAAGTAGCAATGTGGGAGAAATCAATTTTGCGATAGTGATTGCGATTGTGGGGTTGGTGCTTTTCGCACTTCTGATTGGAAATATGCAAACTTATCTCCAATCGACAAGTCTAAGACTAGAAGAATGGAGGGTGAGAAGAAGAGACACAGAGCAATGGATGCACCACAGGCAACTTCCATACGAACTGAAGCAAAGTGTGAGAAAATATGACCAATTCAGATGGATTGCAACTCGTGGTGTCGATGAACAAGATATTCTTAAAGGCCTTCCTATGGATCTCCGACGACAAATCAAACGCCATCTATGTCTTGATCTCGTTCGTCAGGTGCCACTATTCGACGAAATGGAGGAGAGAATGTTAGACGCAATATGCGAGAGGTTAAGACCTTGTTTAAGCACTTCCAACACGTGCCTAGTCCGTGAAGGCGACCCAGTCAACGAGATGCTCTTCATAATCCGCGGCCATCTGGATTCCCACACCACCAACGGCGGCCGGACCGGCTTCTTCAACTCCAGCCGCCTCGGCCCGAGCGACTTCTGCGGCGAGGAGCTGCTGCCATGGGCACTGGACCCTCGCCCGGGCGCCGTGCTGCCGTCGTCGACTCGCACCGTGAAGGCGATCACGGAGGTGGAGGGGTTCGCTCTGATCGCGGAGGACTTGAAGTTCGTGGCGGCGCAGTTCCGGAGGCTGCACAGCAAGCAGGTCAGGTACACTTTCAGGTTCCACTCGCACCAGTGGCGGACGTGGGCGGCTTGTTTTATACAGGCGGCGTGGTTTAGCTACAAGCGGCGGCGGAGGGAGTATGCGGCGGTGAACTGTAGGAGGAGGGTTGGTGGTGAAATAAAGAATGTGGTTCATGGGTCGTTTATGTTGAAGCCTATTGAACCTGACTTCTCTGTGGAAGACAGGTGA 1914 48.22 MTPEWEMMRRNKRGKKKKEVAGESSSRVFSEDYDHVVDRMVVDPRLPILNRWNRVFLVACLVSLFVDPMFFYLPVVKVAEGCVEMSGGLGVALTVVRSMADAFYITQIVVKFRTAYVAPSSRIFGRGELVIDPSKIASNYLVFDFWLDFAAALPLPQAFIWVAIPNIRGSNITPWSYFLRFSILFQYFLRLYLIFPLSDQIIKATGVLMKTAWAGAVYNLMLFMLASHVLGSCWYLLSIGRQMECWKKVCKLGQLDCKYEYFDCKAVGNPSRGAWFEATNISKLCHPTATTFFHFGIFSDSFASTHSSTFFNRFFYCFWWGLRNLSSLGQNLVTSSNVGEINFAIVIAIVGLVLFALLIGNMQTYLQSTSLRLEEWRVRRRDTEQWMHHRQLPYELKQSVRKYDQFRWIATRGVDEQDILKGLPMDLRRQIKRHLCLDLVRQVPLFDEMEERMLDAICERLRPCLSTSNTCLVREGDPVNEMLFIIRGHLDSHTTNGGRTGFFNSSRLGPSDFCGEELLPWALDPRPGAVLPSSTRTVKAITEVEGFALIAEDLKFVAAQFRRLHSKQVRYTFRFHSHQWRTWAACFIQAAWFSYKRRRREYAAVNCRRRVGGEIKNVVHGSFMLKPIEPDFSVEDR 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 63700715 63705946 - Hsped.04g09410.1 Hepe04g0941 568079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0941 637 FunFam Cyclic nucleotide-gated ion channel 1 443 561 - -
Hepe04g0941 637 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 22 601 - -
Hepe04g0941 637 Gene3D Helix hairpin bin 373 436 - -
Hepe04g0941 637 SMART cnmp_10 445 576 IPR000595 -
Hepe04g0941 637 CDD CAP_ED 445 576 IPR000595 -
Hepe04g0941 637 Pfam Ion transport protein 52 370 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0941 637 ProSiteProfiles cAMP/cGMP binding motif profile. 445 530 IPR000595 -
Hepe04g0941 637 FunFam Cyclic nucleotide-gated ion channel 1 372 436 - -
Hepe04g0941 637 Gene3D Jelly Rolls 443 563 IPR014710 -
Hepe04g0941 637 Gene3D - 59 369 - -
Hepe04g0941 637 MobiDBLite consensus disorder prediction 1 23 - -
Hepe04g0941 637 SUPERFAMILY cAMP-binding domain-like 375 565 IPR018490 -
Hepe04g0941 637 SUPERFAMILY Voltage-gated potassium channels 50 367 - -
Hepe04g0941 637 PRINTS EAG/ELK/ERG potassium channel family signature 108 117 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe04g0941 637 PRINTS EAG/ELK/ERG potassium channel family signature 225 235 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe04g0941 637 PRINTS EAG/ELK/ERG potassium channel family signature 340 351 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe04g0941 637 PRINTS EAG/ELK/ERG potassium channel family signature 358 367 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
Hepe04g0941 637 PRINTS EAG/ELK/ERG potassium channel family signature 408 415 IPR003938 GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0941 Hepe-Chr4:63700715 Hepe09g0522 Hepe-Chr9:4885919 2.70e-231 dispersed
Hepe04g0941 Hepe-Chr4:63700715 Hepe08g0898 Hepe-Chr8:8194439 1.18e-297 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0941 K05391 - csv:101221856 961.829