Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0977 ATGCCGATCCGTAACATTGCCATCGGAAGGCCCGAGGAGGCTACACATCCGGATGCTTTGAAGGCTGGTTTGGCTGAGTTCATTTCCACGTTGATTTTTGTCTTTGCTGGTCAGGGTTCCGGCATCGCTTTTAGTAAGCTTACTGACGGTGGTGCCGCGAGTCCCGCCGGCCTCATCTCTGCCTCCATTGCCCATGCTTTTGCCCTTTTTGTCGCCGTCTCCGTCGGCGCCAACATCTCTGGTGGCCATGTTAACCCTGCCGTCACCTTCGGTGCCTTCGTCGGCGGTAACATCACCCTCCTACGTGGCATCATCTACTGGATCGCCCAACTCCTCGGATCAGTCGTCGCTTGCTTGCTCCTTAAGTTTGTCACTGGATTGCCCACCGGAAGCTTCGCTCTATCGGCAGGAGTTGGTGAAATAAACGCCTTGGTTTTCGAGATCGTGATGACATTCGGATTGGTGTACACGGTGTACGCGACCGCAGTGGATCCCAAGAAGGGCAGTATTGGAACAATTGCACCGATCGCAATCGGTTTCATCGTCGGAGCTAACATTTTGGCCGGCGGAGCATTCACCGGAGCGTCGATGAACCCAGCTGTGGCATTTGGGCCGTCAGTTGTGAGCTGGTCATGGGCCAACCACTGGGTCTACTGGGCCGGGCCTCTTATTGGAGGTGGGCTTGCTGGGCTCATCTACGAGTTCATCTTCATTTCCAACACCCACGAGCAGTTGCCAACCACCGACTACTAA 753 55.25 MPIRNIAIGRPEEATHPDALKAGLAEFISTLIFVFAGQGSGIAFSKLTDGGAASPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVVACLLLKFVTGLPTGSFALSAGVGEINALVFEIVMTFGLVYTVYATAVDPKKGSIGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWANHWVYWAGPLIGGGLAGLIYEFIFISNTHEQLPTTDY 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 64216315 64217988 + Hsped.04g09770.1 Hepe04g0977 568115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0977 250 CDD MIP 21 236 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 Pfam Major intrinsic protein 14 233 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 FunFam Probable aquaporin TIP1-1 4 250 - -
Hepe04g0977 250 SUPERFAMILY Aquaporin-like 13 246 IPR023271 -
Hepe04g0977 250 Gene3D Glycerol uptake facilitator protein. 4 250 IPR023271 -
Hepe04g0977 250 PANTHER AQUAPORIN-8 5 246 IPR034294 GO:0006833(PANTHER)|GO:0009705(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Hepe04g0977 250 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 PRINTS Major intrinsic protein family signature 146 164 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 PRINTS Major intrinsic protein family signature 216 236 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 PRINTS Major intrinsic protein family signature 179 201 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe04g0977 250 ProSitePatterns MIP family signature. 83 91 IPR022357 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g1531 Hepe-Chr3:72168875 Hepe04g0977 Hepe-Chr4:64216315 1.27e-98 dispersed
Hepe04g0977 Hepe-Chr4:64216315 Hepe06g1681 Hepe-Chr6:67823776 2.06e-100 dispersed
Hepe07g2308 Hepe-Chr7:67404886 Hepe04g0977 Hepe-Chr4:64216315 4.15e-101 transposed
Hepe04g0977 Hepe-Chr4:64216315 Hepe05g0292 Hepe-Chr5:3585061 1.77e-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0977 K09873 - csv:101204225 466.463