Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g0992 ATGAAATTGCCGGTTTTTGTAATCCCTCTGATCGCTGTTTCTTGTATTCTCGTTGTTTTGGGTCCTCAGTTCTCATCGGACTTTACTTTCTTTCAAAAACATGATTCCATTTCGAGCTCTGCTTCTTCTTCCACCAAAACAGAGGATTTTTCTTTGAATACCACGGCGGAGACTGCGGCGGAGACGGTGGTGGATGGTCAAACGGTGGAACAAGAACTACTACTACAGAAACAACCTCTGTTCGATGACTCTGTATTAAACCACTCTGTTTTTTCTTCACCGCCGCCGCCATCGATCGATGAACTACAGAGTCTCGAACAACTTCCTAATAGGACGACAGTGAAGGAAGAATTGGAAGAAACCGCCATTAATGAAGTGAGAAATGTTTCTTCTTCTGAATCTTTGGTGAAAGGAAGAAGACAGAGGGAATATACAAAATTGGAAAAAATTGAAGCAGGGCTTACAAGAGCAAGAGCTGCCATTAAAGAAGCTAAGTTCCAAAACCAAACTCAAGATCCTGAATTTGTTCCCACTGGCCCAATGTATTGGAATGCCAAAGCATTTCATAGGAGCTACCTAGAAATGGAAAAGGAGCTGAAGATCTTTGTGTATGAAGAAGGAGAGCCTCCCCTATTTCACAATGGCCCCTGCAAGAGCATTTACTCAACCGAAGGCAACTTCATCAACGCCATCGAAATGGACTCCCGGTTTCGAACCAAAGATCCCAACAAGGCCCACGTCTTCTTCCTCCCCATTAGTGTCGCCATGCTCGTTCGGTTCGTCTACGTCCACGACTCCCATGATTTCGCTCCGATACGACACACTGTCGTTGATTATGTCAATGTCATTGGAACCAAATATCCGTTCTGGAATCGCAGCCTCGGCTCCGATCATTTCATGCTCTCATGCCATGATTGGGGTCCAGAAGCATCAAAGTCAGTTCCCAATTTGTACAAAAACTCCATTAGAGTACTCTGCAACGCCAACACATCGGAAGGCTTCAACCCATCAAAGGACGTTTCATTCCCAGAAATCAATCTGCAGACGGGTTTCCTGACCGGATTCATCGGCGGCCCATCACCCTCCCGGCGGCCAATTCTAGGCTTCTTCGCCGGTGGACTTCACGGCCCAATAAGGCCAATTCTGATCAAGCAATGGGAGAATCAAGACGACGACATTCAAGTCCACCAGTACCTCCCCAAAGGAGTGTCTTACATTGAGATGATGAGGAAGAGCAAATTCTGTCTCTGCCCCAGCGGCTACGAAGTCGCCAGCCCCAGAATTGTCGAGGCCATTTACACCGGCTGCGTTCCGGTCCTCATTTCCGACCACTACGTCCCGCCGTTCAGCGACGTTCTCAATTGGAACTCTTTCTCCGTGCAAGTCTCCGTCGACGACATTCCCAATTTGAAGAAGATCCTCACCGGAATATCGTCGAGGCAGTACCTGAGAATGTATCGGAGAGTGGTCAACGTTAGAAGACACTTTGAAGTCAACTCTCCGCCGAAGAGATTTGATGTGTACCACATGATCCTTCACTCTGTGTGGCTTAGAAGACTCAATCTTAGACTGCGTGATCGTTAA 1584 47.22 MKLPVFVIPLIAVSCILVVLGPQFSSDFTFFQKHDSISSSASSSTKTEDFSLNTTAETAAETVVDGQTVEQELLLQKQPLFDDSVLNHSVFSSPPPPSIDELQSLEQLPNRTTVKEELEETAINEVRNVSSSESLVKGRRQREYTKLEKIEAGLTRARAAIKEAKFQNQTQDPEFVPTGPMYWNAKAFHRSYLEMEKELKIFVYEEGEPPLFHNGPCKSIYSTEGNFINAIEMDSRFRTKDPNKAHVFFLPISVAMLVRFVYVHDSHDFAPIRHTVVDYVNVIGTKYPFWNRSLGSDHFMLSCHDWGPEASKSVPNLYKNSIRVLCNANTSEGFNPSKDVSFPEINLQTGFLTGFIGGPSPSRRPILGFFAGGLHGPIRPILIKQWENQDDDIQVHQYLPKGVSYIEMMRKSKFCLCPSGYEVASPRIVEAIYTGCVPVLISDHYVPPFSDVLNWNSFSVQVSVDDIPNLKKILTGISSRQYLRMYRRVVNVRRHFEVNSPPKRFDVYHMILHSVWLRRLNLRLRDR 527
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 64463208 64466453 + Hsped.04g09920.1 Hepe04g0992 568130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g0992 527 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Hepe04g0992 527 Pfam Exostosin family 196 475 IPR040911 -
Hepe04g0992 527 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 116 519 IPR004263 GO:0006486(InterPro)|GO:0016757(InterPro)
Hepe04g0992 527 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 222 478 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0992 Hepe-Chr4:64463208 Hepe09g0644 Hepe-Chr9:6026604 3.46e-149 dispersed
Hepe04g0992 Hepe-Chr4:64463208 Hepe10g0241 Hepe-Chr10:2552060 5.43e-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g0992 - - - 0.0