Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1072 ATGGGAGTTCCTCAGGCGATGGAAATTCTGACCGGGAGAGCTGCACTTATCAAAGAGTCGCTGCAGAAGAGCCAGAATGTCACCGAGAACATGGTCTCCATTCTCGGCTCCTTCGACTACCGTCTCTCCGCCCTCGAAGCCGCAATGCGCCCTACTCAGATAAGAACTCATTCGATTCGGAGGGCGCATGAGAATATTGACAAGACATTGAAGCATGCAGACAGTATACTGGCTCAGTTTGATCTTACACGCAAGGCCGAGGCTAAAATACTCAGGGGGCCACATGAGGACTTAGAAATGTATTTGGAAGCAATCGATCAACTACGAAGCACAAATCGCTACTTTACTGGGCACAAAAATTTCAAAAGTAACGATGCGATTCTTATCCATACAAGCAACTTGCTTATTAAAGCCATTTCAAAGCTGGAAGATGAGTTCAGACAGCTTTTAGCGAATTACAGTAAGCCAGTGGAACCCGATCGTCTTTTCGATTGCCTCCCCAACTCTTTGCGTCCATCATCAGCATCTGGGCACCATGGTGATGGTAGCAAAAATAGTTCTGACCATCCCAACAAAAGCTTAGAAGCTGCCATCTTCATTCCCCCAACTCTTATTCCTCCCAGGGTTCTTCCATTGTTGCATGATTTGGCCCAACAAATGATTCTAGCTGGCCATCAGCAGCAACTGTTTAGAATATACAGGGAAACTCGCGCTTCAGTTTTAGAACAGAGTCTTAGGAAATTAGGTGTTGAGAGGCTTACCAAGGATGATGTCCAGAAAATGCAGTGGGAGGCTCTTGAAGCTAAGATTGGGAACTGGATACATTACATGCGCATTGCTGTCAAACTGCTGTTTGCTGGGGAAAGGAAAATCTGTGATCAAATATTTGATGGTCCAGACTCTCTCCTGGATCAATGCTTCGCAGATGTGACTACAAACAGTGTGTCAATGCTACTAAGTTTTGGAGAAGCAATTGCCAAAAGCAAGAGATCTCCAGAAAAATTGTTTGTTCTTTTAGACATGTTTGAAATTATGCGAGAACTGCAATCTGAGATTGAAGTACTTTTTGGAAATAAAGCATGCATTGAAATGCGGGATTCTGCATTGAGCTTAACACAACGCCTTGCCGAGACAGCTCAAGAGACCTTTGTTGATTTTGAAGAAGCCGTAGAAAAAGATGCCACAAAAACTGCTGTTCTTGATGGGACTGTTCATCCCTTGACTAGTTATGTGATAAACTACGTCAAGTTTTTATTTGACTACCGATCTACTTTGAAGCAACTATTCCAAGACTTTGACGCTGGTGATCCAGATGCTCAGTTAGCAGTGGTAACTACAAGAATTATGCAGGCCCTTCAGACTAATCTTGATGGAAAATCTAAGCAATATAGGGATCCTGCATTAACTCAATTATTTCTGATGAACAATATTCACTATATAGTGAGATCTGTCCGAAGATCGGAAGCAAAGGATTTGTTGGGTGATGACTGGGTGCAGATACATCGAAGGATTGTGCAGCAGCATGCAAATCAATACAAGCGGATTTCTTGGGCAAAGATTTTGCAGTGCCTCACTGTTCAGGGCTCTGGCAGTGGTGGTGCTTCAGCAGACGCTAGCGGCGGACTTTCAAGAGCTATGGTGAAAGATAGGTTCAAGACTTTTAACATCCAATTTGAAGAGCTTCATCAACGGCAGTCTCAGTGGACAGTTCCTGACAGTGAGTTGCGGGAGTCATTGAGGTTGGCAGTAGCTGAAGTCTTATTGCCTGCCTACCGATCCTTCATCAAGCGTTTCGGGCCTTTGGTTGATAATGGGAAAAATCCTCAAAAATGCACCAGATATTCACCCGAGGATCTCGAGCGTATGCTAAATGAATTTTTCGAGGGCAAGACATTCGGTGAACAAAAGCGCTAG 1914 44.1 MGVPQAMEILTGRAALIKESLQKSQNVTENMVSILGSFDYRLSALEAAMRPTQIRTHSIRRAHENIDKTLKHADSILAQFDLTRKAEAKILRGPHEDLEMYLEAIDQLRSTNRYFTGHKNFKSNDAILIHTSNLLIKAISKLEDEFRQLLANYSKPVEPDRLFDCLPNSLRPSSASGHHGDGSKNSSDHPNKSLEAAIFIPPTLIPPRVLPLLHDLAQQMILAGHQQQLFRIYRETRASVLEQSLRKLGVERLTKDDVQKMQWEALEAKIGNWIHYMRIAVKLLFAGERKICDQIFDGPDSLLDQCFADVTTNSVSMLLSFGEAIAKSKRSPEKLFVLLDMFEIMRELQSEIEVLFGNKACIEMRDSALSLTQRLAETAQETFVDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYRSTLKQLFQDFDAGDPDAQLAVVTTRIMQALQTNLDGKSKQYRDPALTQLFLMNNIHYIVRSVRRSEAKDLLGDDWVQIHRRIVQQHANQYKRISWAKILQCLTVQGSGSGGASADASGGLSRAMVKDRFKTFNIQFEELHQRQSQWTVPDSELRESLRLAVAEVLLPAYRSFIKRFGPLVDNGKNPQKCTRYSPEDLERMLNEFFEGKTFGEQKR 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 65363907 65372911 - Hsped.04g10720.1 Hepe04g1072 568210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1072 637 Gene3D Exocyst complex component Exo70 74 637 - -
Hepe04g1072 637 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 630 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(PANTHER)|GO:0006887(InterPro)
Hepe04g1072 637 Pfam Exocyst complex component Exo70 N-terminal 69 151 - -
Hepe04g1072 637 SUPERFAMILY Cullin repeat-like 75 628 IPR016159 -
Hepe04g1072 637 Pfam Exo70 exocyst complex subunit C-terminal 272 625 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1104 Hepe-Chr1:75944957 Hepe04g1072 Hepe-Chr4:65363907 0.0 dispersed
Hepe04g1072 Hepe-Chr4:65363907 Hepe10g1367 Hepe-Chr10:49930044 7.80e-107 dispersed
Hepe04g1072 Hepe-Chr4:65363907 Hepe09g0051 Hepe-Chr9:422913 1.05e-105 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1072 K07195 - csv:105436019 1159.05