Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1077 | ATGAACAACGGCACGGCGGACAGCGGCGGATTTCTCTCCTCAACCAACATCGGCGGATTCGGATACGGAATCGGCGTCTCGCTAGGGATTTTGATTCTCATCACTACAATCCTCTTGGCTTCCTATTACTGCACCAGAACCGGCCTATCCTCGACCGCCGTGATTCAGAGTACCGCCAATCGCTCGCCGCAGCAGGAAGACGCCGCCGTCGTCGTCGAAATCGGACTCGATCAGGAGACGATTATGAGTTATCCGAAATTGCTGTATTCGGAGGTGAAACTAATTCAGAAGAACGATTCGAGTAGTGCTTCTTGTTGTTGTTCGATCTGTTTGGCCGATTACAAGAACTCTGATGTTCTTCGGATTTTGCCTGATTGCGGCCATTTGTTTCACCTCAAATGCGTCGATCCGTGGTTGAGGCTTCACCCGACCTGTCCGGTTTGCCGGACCTCGCCGATTCCGACGCCGTTGTCGACTCCTCTGGCAGAGCAAGTTCCATTGGCGAGCCGCCGCGATTGA | 519 | 53.37 | MNNGTADSGGFLSSTNIGGFGYGIGVSLGILILITTILLASYYCTRTGLSSTAVIQSTANRSPQQEDAAVVVEIGLDQETIMSYPKLLYSEVKLIQKNDSSSASCCCSICLADYKNSDVLRILPDCGHLFHLKCVDPWLRLHPTCPVCRTSPIPTPLSTPLAEQVPLASRRD | 172 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 65408928 | 65409735 | + | Hsped.04g10770.1 | Hepe04g1077 | 568215 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1077 | 172 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 14 | 166 | IPR045899 | - | |
Hepe04g1077 | 172 | Pfam | Ring finger domain | 106 | 149 | IPR001841 | - | |
Hepe04g1077 | 172 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 153 | IPR013083 | - | |
Hepe04g1077 | 172 | SUPERFAMILY | RING/U-box | 82 | 154 | - | - | |
Hepe04g1077 | 172 | ProSiteProfiles | Zinc finger RING-type profile. | 107 | 149 | IPR001841 | - | |
Hepe04g1077 | 172 | SMART | ring_2 | 107 | 148 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1077 | Hepe-Chr4:65408928 | Hepe05g0814 | Hepe-Chr5:21213006 | 1.21e-28 | dispersed | |
Hepe02g2894 | Hepe-Chr2:78018265 | Hepe04g1077 | Hepe-Chr4:65408928 | 1.35e-18 | transposed | |
Hepe05g1981 | Hepe-Chr5:70278527 | Hepe04g1077 | Hepe-Chr4:65408928 | 1.49e-35 | transposed | |
Hepe04g1077 | Hepe-Chr4:65408928 | Hepe05g0457 | Hepe-Chr5:6040006 | 7.04e-60 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1077 | - | - | - | 0.0 |