Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1087 ATGGCAATAGACCAGGCTGAGCTTAGCACTGTGCAGGTTCTTACAAGGGACATTCCATGGGAGACATACATGACTACTAAACTTATCAGTGGAACAAGCCTTCAGCTGTTAAGGCGTTATGATAACAGACCAGAAAGTTACAGGGCACAGTTGTTGGATGATGATGGTCCAGCATATGTTCGGGTATTTGTTAGCATTTTACGCGATATATTTAAGGAAGAAACAGTGGAATATGTTCTAGCATTAATCGATGAAATGCTTACAGCAAACCCAAAAAGAGCAAGATTGTTCCATGATCACTCTCTTGAAAGCGAAGATGCTTATGAACCTTTCCTAAGATTGCTTTGGAAGGGCAATTGGTTCATACAGGAGAAGAGCTGTAAAATACTTGCTCTGATAGTGAGTGCTAGAAAACAAACTCATGATGGCAGTTTTGAAAATGGCGACGCCTCAAACTCCAAGAAGAAAATTACTACCATTGATGATGTTTTGGATGGACTGGTGAAATGGCTTTGTGCTCAGCTGAAGAATCCTTCACATCCTAGTCGTGCTGTACAGACTTCTATCAATTGCCTTGCAACTCTGCTGAAGGAACCAAAGGTCAAATCCTCCTTTGTCCAGGCAGATGGAGTGAAATTGCTTATTCCTTTGATTTCTCCTGCATCAACCCAACAATCTATTCAGCTTCTCTATGAAACTTGTCTTTGTGTTTGGCTCTTATCATATTATGAGCCGGCAATTGAATTCTTGGCCACTTCTAGAACCCTTCCAAGACTCATCGACGTTGTCAAGAGTTCCACAAAAGAAAAGGTTGTCCGAGTTATTATTTTGACCTTGAGGAACTTACTCCACAAGGGGACATTTGGAGCTCAAATGGTGGGTCTCGGACTACCACAAATTGTTCAAAGTTTGAAATCACAAGCATGGAGTGATGAGGACCTTTTGGAGGCTTTGAGTCAACTAGAAGAGGGGCTGAAAGATAATATCAAGAAACTGAGTTCTTTTGACAAGTATAAGCAAGAAGTCCTTCTCGGCCATCTTGACTGGTCTCCTATGCACAAAGATGTAAATTTCTGGCGTGAAAATATTACAAGCTTCGAAGAGAACGACTTCAAGATATTGAGGGTCCTAATCACCATTCTGGACACTTCCAGTGATCCAAGGGCTCTGGCAGTTACTTGTTTTGATATTTCCCAGTTCATTCAACACCATCCAGCTGGAAGAGTTATAGTGACAGACCTCAAGGCCAAGGAAAGAGTGATGAAACTGATGAATCATGAGAATGCTGAGGTTACCAAATATGCCCTTCTGTGCATTCAAAGGCTGTTCCTAGGTGCCAAGTATGCCAGCTTTCTGCAGGCTTAA 1365 41.9 MAIDQAELSTVQVLTRDIPWETYMTTKLISGTSLQLLRRYDNRPESYRAQLLDDDGPAYVRVFVSILRDIFKEETVEYVLALIDEMLTANPKRARLFHDHSLESEDAYEPFLRLLWKGNWFIQEKSCKILALIVSARKQTHDGSFENGDASNSKKKITTIDDVLDGLVKWLCAQLKNPSHPSRAVQTSINCLATLLKEPKVKSSFVQADGVKLLIPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEFLATSRTLPRLIDVVKSSTKEKVVRVIILTLRNLLHKGTFGAQMVGLGLPQIVQSLKSQAWSDEDLLEALSQLEEGLKDNIKKLSSFDKYKQEVLLGHLDWSPMHKDVNFWRENITSFEENDFKILRVLITILDTSSDPRALAVTCFDISQFIQHHPAGRVIVTDLKAKERVMKLMNHENAEVTKYALLCIQRLFLGAKYASFLQA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 65527433 65539385 - Hsped.04g10870.1 Hepe04g1087 568225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1087 454 CDD VATPase_H 4 448 - -
Hepe04g1087 454 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 400 407 IPR018506 GO:0020037(InterPro)
Hepe04g1087 454 Gene3D - 345 446 IPR038497 -
Hepe04g1087 454 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 2 453 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Hepe04g1087 454 PIRSF V-ATP_synth_H 3 453 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Hepe04g1087 454 SMART arm_5 243 284 IPR000225 GO:0005515(InterPro)
Hepe04g1087 454 SMART arm_5 198 242 IPR000225 GO:0005515(InterPro)
Hepe04g1087 454 SMART arm_5 404 444 IPR000225 GO:0005515(InterPro)
Hepe04g1087 454 Pfam V-ATPase subunit H 7 325 IPR004908 GO:0000221(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Hepe04g1087 454 SUPERFAMILY ARM repeat 12 444 IPR016024 -
Hepe04g1087 454 FunFam V-type proton ATPase subunit H 345 446 - -
Hepe04g1087 454 Gene3D - 6 333 IPR011989 -
Hepe04g1087 454 Pfam V-ATPase subunit H 331 443 IPR011987 GO:0000221(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1087 Hepe-Chr4:65527433 Hepe08g1504 Hepe-Chr8:18798985 1.07e-319 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1087 K02144 - csv:101217015 859.751