Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1107 ATGGCGACCATGAATTCCAGTGTTCTTGCCTGCAATTACGCCATTTCAGGCGCTGGATCGGCCGACCTGTCCAACTCCAAACTCACCGCCGTGCCTTCTGTTGCATCGCCGGGGGTTTCTGGTTACAAATTGCCTGCGATTAGAGCTCAACAGGCTAGGGTTCCTGAAGCTAAGAATGATGGAAGGAGAACTGCGCTTCTTTACCTTGGTGCTTCCCTCTTTGCTGCTGCTGCTGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAGGAGTAAAGCTAACAAGGAATTGAATGACAAGAAAAGATTGGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTCAGTTTGGAACATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCTAAACAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAGGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 519 47.4 MATMNSSVLACNYAISGAGSADLSNSKLTAVPSVASPGVSGYKLPAIRAQQARVPEAKNDGRRTALLYLGASLFAAAAAASNSSANAGVIEEYLERSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 65961981 65963889 + Hsped.04g11070.1 Hepe04g1107 568245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1107 172 Gene3D - 88 172 IPR044907 -
Hepe04g1107 172 FunFam Photosystem I reaction center subunit N 88 172 - -
Hepe04g1107 172 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 44 172 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)
Hepe04g1107 172 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 172 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1107 K02701 - csv:101204396 298.516