Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1123 ATGATGGTGGGAAAATGTTTGATTTTGAAATGGCTTTGGCTCCCACTTCTCATTTTCCTCATCATCTTCCATGTTGCCTCTGCTGAACAAACTTTATCTTTCTCCTCCTCCTCCTTCATTAACCGCAAAATCTCCCCATTCCGAAGCGCTTCATCTGAAACCACTTATGCCGTCATTTTCGACGCCGGTAGCTCCGGCAGCCGCCTTCATGTCTTCCATTTCGACTCCAATTTGGAGCTTCTTTACATCGGTAACGACATTGATATCACTGAAAAGGTTCGTCCAGGGCTGAGTTCGTTCTCGGACAACCCAGAGAAGGCGGCAGAATCTCTGGTTCCTCTCCTCCAAGAAGCTAAAACAGTTGTGCCCTCCCATTTTTATCCCACCACACCCATTCTTCTGGGGGCAACTGCAGGGTTGAGGCTGTTGGATGCAGATAAAGCTGAGAGAATTTTACAAGTGGTTAGAGAATTTTTTAAAACGAAGAGTACATTCAAGTATGACGCTGATGGAGTTACCATTCTTAGCGGTAATCAGGAGGGTTCCTACATGTGGGCAACAATAAACTATTTGTTGGGGAATTTAGAGGGAAAATATTCAAAGACAGTGGGAGTGGTAGACCTTGGTGGTGCCTCTGTTCAAATGGCTTATGCCATCTCTGAAGATGCTGCAGCACAGGCTCCCAATTCACCACAAATTCAAGACCCTTATATTCAACAGTTTTATTTCAAGGGAACCAAATTTCCTCTCTACGTCCACAGTTATTTGAGTTATGGTTCACTTGCGGTGAGAGCTGAGATTTTGAAAGTAACCAAAGATGCGCCAAACCCATGCATCTTAGCTGGTTTTCAAGGTACATACAAATACAACGGGGAGGAATACAAAGCGTCAGCTTCTCCATTAGGGCCAAATTTGAGAGGGTGCGAGAGAGTGATTTTGAAGGCTATGAAAGTGAACAAACCCTGTAATTACAGCGGTTGCAGTTTCAACGGAATTTGGAACGGCGGCGGCGGAGGCGGCTTCCAAAATCTCTATTTTGCTTCCAGCTTCTACGACATGACAGCCAAGATGGGTATCATCGACTCAAACAAAAATGTGGTCGAGATTCGACCAACTGACTTAAAGAAAGTGGCAGAGTGGATTTGTTTAACCAAATATGAGGATGCGAAAACAGTGTTCCCCAATTACTTTCGGGAGAACTTGCAATACTTGTGCATGGATATTCTCTACCAATATTATCTCATTGTTCATGGCTTTGGTGTTGATCCGAATAAAAAGATAGCATTGGTGAATCAATTGGAGTATCATGGTGCTAATGTTGACGTTGCATGGCCCTTGGGCAATGCCCTAGCTGTTGTCTCAAAAAATAACGAAGCACTATTTGTCACTGCCTAA 1395 44.01 MMVGKCLILKWLWLPLLIFLIIFHVASAEQTLSFSSSSFINRKISPFRSASSETTYAVIFDAGSSGSRLHVFHFDSNLELLYIGNDIDITEKVRPGLSSFSDNPEKAAESLVPLLQEAKTVVPSHFYPTTPILLGATAGLRLLDADKAERILQVVREFFKTKSTFKYDADGVTILSGNQEGSYMWATINYLLGNLEGKYSKTVGVVDLGGASVQMAYAISEDAAAQAPNSPQIQDPYIQQFYFKGTKFPLYVHSYLSYGSLAVRAEILKVTKDAPNPCILAGFQGTYKYNGEEYKASASPLGPNLRGCERVILKAMKVNKPCNYSGCSFNGIWNGGGGGGFQNLYFASSFYDMTAKMGIIDSNKNVVEIRPTDLKKVAEWICLTKYEDAKTVFPNYFRENLQYLCMDILYQYYLIVHGFGVDPNKKIALVNQLEYHGANVDVAWPLGNALAVVSKNNEALFVTA 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 66198385 66205850 + Hsped.04g11230.1 Hepe04g1123 568261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1123 464 Gene3D - 56 450 - -
Hepe04g1123 464 Gene3D Exopolyphosphatase. Domain 2 176 438 - -
Hepe04g1123 464 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 175 190 IPR000407 GO:0016787(InterPro)
Hepe04g1123 464 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 457 IPR000407 GO:0016787(InterPro)
Hepe04g1123 464 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 455 IPR000407 GO:0016787(InterPro)
Hepe04g1123 464 CDD NBD_sugar-kinase_HSP70_actin 58 217 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1123 Hepe-Chr4:66198385 Hepe10g1947 Hepe-Chr10:56369630 2.07e-172 dispersed
Hepe04g1123 Hepe-Chr4:66198385 Hepe04g1124 Hepe-Chr4:66216309 9.71e-313 tandem
Hepe04g0637 Hepe-Chr4:59527584 Hepe04g1123 Hepe-Chr4:66198385 2.07e-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1123 K14641 - cit:102627845 454.907