Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1124 ATGATGGAGGGAAAATGTTTGATTTTGAAATGGCTTTGGCTCCCACTTCTCATTTTCCTCATCATCTTCCATGTTGCCTCTGCTGAACAAACTTTATCTTTCTCCTCCTCCTCCTTCATTAACCGCAAAATCTCCCCATTCCGAAGCGCTTCATCTGAAACCACTTATGCCGTCATTTTCGACGCCGGTAGCTCCGGCAGCCGCCTTCATGTCTTCCATTTCGACTCCAATTTGGAGCTTCTTTACATCGGTAACGACATTGATATCACTGAAAAGATTCGTCCAGGGCTGAGTTCGTACTCCGACCACCCAGAGAAGGCGGCGGAATCTCTGGTTCCTCTCCTCCAAAAAGCTAAAACAGTTGTGCCCTCCGATCTTTATTCCACCACACCCATTCTTCTGGGGGCAACTGCAGGGTTGAGGCTGTTGGATGCAGATAAAGCTGAGAGAATTTTACAAGTGGCTAGAGAACTTTTTAAAACGAAAAGTACATTCAAGTATGAAGCTGATGGAGTTACTATTCTTAGCGGTAATCAGGAGGGTTCCTACATGTGGGCAACAATAAACTATTTGTTGGGGAATTTAGAGGGAAAATATTCAAAGACAGTGGGAGTGGTAGACTTTGGTGGTGCCTCTGTTCAAATGGCTTATGCCATCTCCGAAGATGCTGCAGCACAGGCTCCCAATTCACCACAAATTCAAGACCCTTATATTCAACAGTTTTATTTCAAGGGAACCAAGTTTTCTCTCTATGTCCACAGTTATTTGCATTATGGTGCAGTTGCGGGGAGAGCTGAGATTTTGAAAGTAACCAAAGATGCGCCAAACCCATGCATCTTAGCTGGTTATCAAGGTACATACAAATACAACGGAGAGGAATACAAAGCGTCAGCTTCTCCATTAGGGCCAAATTTGAGAGGGTGCGAGAGAGTGATTTTGAAGGCTATGAAAGTGAACAAACCCTGTAATTACAGCGGTTGCAGTTTCAACGGAATTTGGAACGGCGGCGGCGGAGACGGCTTCCAAAATCTCTATTTTGCTTCTAGCTTCTACGAAGTTGCAGCCAAGATTGGTCTCATCGACTTGAACAAAAAGTTGGCCGAAGTTCGACCAGCTGATCTTAAAAAAGTGGCAGAATGGGCTTGCTTAACCAAATATGAGGATGCGAAAGTAGTGTTGCCCAATTATTTTGAGGATAAGTGGCAATTCTTGTGCATGGATATTCTCTACGAATATTCACTCATTGTTCATGGCTTTGGTGTTGATCCCAATAAAAAGATATCATTGGTGAGTCAATTGGAGTATCATGGTTCTAATATTGACGTTGCATGGCCCTTGGGCAATGCCCTAGCTGTGGTCTCAAAAAATAACGAAGCACTATTTGTCACTGCCTAA 1395 43.87 MMEGKCLILKWLWLPLLIFLIIFHVASAEQTLSFSSSSFINRKISPFRSASSETTYAVIFDAGSSGSRLHVFHFDSNLELLYIGNDIDITEKIRPGLSSYSDHPEKAAESLVPLLQKAKTVVPSDLYSTTPILLGATAGLRLLDADKAERILQVARELFKTKSTFKYEADGVTILSGNQEGSYMWATINYLLGNLEGKYSKTVGVVDFGGASVQMAYAISEDAAAQAPNSPQIQDPYIQQFYFKGTKFSLYVHSYLHYGAVAGRAEILKVTKDAPNPCILAGYQGTYKYNGEEYKASASPLGPNLRGCERVILKAMKVNKPCNYSGCSFNGIWNGGGGDGFQNLYFASSFYEVAAKIGLIDLNKKLAEVRPADLKKVAEWACLTKYEDAKVVLPNYFEDKWQFLCMDILYEYSLIVHGFGVDPNKKISLVSQLEYHGSNIDVAWPLGNALAVVSKNNEALFVTA 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 66216309 66222443 + Hsped.04g11240.1 Hepe04g1124 568262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1124 464 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 457 IPR000407 GO:0016787(InterPro)
Hepe04g1124 464 Gene3D - 56 450 - -
Hepe04g1124 464 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 175 190 IPR000407 GO:0016787(InterPro)
Hepe04g1124 464 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 11 455 IPR000407 GO:0016787(InterPro)
Hepe04g1124 464 CDD NBD_sugar-kinase_HSP70_actin 58 217 - -
Hepe04g1124 464 Gene3D Exopolyphosphatase. Domain 2 176 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g0637 Hepe-Chr4:59527584 Hepe04g1124 Hepe-Chr4:66216309 2.23e-155 dispersed
Hepe04g1124 Hepe-Chr4:66216309 Hepe10g1947 Hepe-Chr10:56369630 6.77e-176 dispersed
Hepe04g1123 Hepe-Chr4:66198385 Hepe04g1124 Hepe-Chr4:66216309 9.71e-313 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1124 K14641 - cit:102627845 470.7