Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1154 | ATGGCCTCAGAATTAGAAGAGATAATGCTGAGTACTCATCTATTGCAACCCCAACACCAAAATAACTATTTATTTTCTTTCCCTCATCAATATCAAAACAACAATTTTCTTCATTTCTCCGGCGCCGTCGCCGGCGCCGACCAACAACAACAACAACCAATTCTGTTTTCTTTGAAACCCTCTCTTCTTCACTTCCCTTCAACAACCACATCTTCACCTTCTTCCTCTCTCTGGGATGTGGGGGAGAGCTTTATGAGGGGGAGAAATTGGTGTGGTGGCGGTGGCGGTGGCGGTGGCGACGGAGACAACAACCGTAAGCTAGGGTTGAGGGTGTCGACGGCGGCGGCGACGATGAAGAGGATAAAAGGGAGAAAGAAAGTGAGAGAGCCAAGATTCTGCTTCAAAACCATGAGCGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTACGGCCAGAAAGTTGTTAAGAACACCCTCCATCCAAGGAGTTACTATCGTTGCACACAAGACAATTGTAGGGTAAAGAAGCGAGTTGAACGATTAGCAGAAGATCCGAGAATGGTGATAACGACCTACGAAGGACGACACGCTCATTCACCGTCACCTGATAATTTAGAAGAGACGATGGGTTCGCTACCGTCGGGCTGCCTTAACAACTTCTTCTGGTAG | 675 | 47.26 | MASELEEIMLSTHLLQPQHQNNYLFSFPHQYQNNNFLHFSGAVAGADQQQQQPILFSLKPSLLHFPSTTTSSPSSSLWDVGESFMRGRNWCGGGGGGGGDGDNNRKLGLRVSTAAATMKRIKGRKKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHAHSPSPDNLEETMGSLPSGCLNNFFW | 224 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 66707519 | 66709688 | - | Hsped.04g11540.1 | Hepe04g1154 | 568292 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1154 | 224 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 110 | 205 | IPR044810 | GO:0003700(InterPro) | |
Hepe04g1154 | 224 | ProSiteProfiles | WRKY domain profile. | 138 | 203 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1154 | 224 | Pfam | WRKY DNA -binding domain | 144 | 200 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1154 | 224 | SMART | WRKY_cls | 143 | 202 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1154 | 224 | FunFam | WRKY transcription factor 57 | 129 | 203 | - | - | |
Hepe04g1154 | 224 | SUPERFAMILY | WRKY DNA-binding domain | 135 | 202 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1154 | 224 | Gene3D | WRKY domain | 130 | 196 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1154 | Hepe-Chr4:66707519 | Hepe04g1972 | Hepe-Chr4:74567774 | 7.83e-33 | dispersed | |
Hepe04g1154 | Hepe-Chr4:66707519 | Hepe04g1162 | Hepe-Chr4:66823337 | 1.22e-24 | proximal | |
Hepe01g0632 | Hepe-Chr1:68203833 | Hepe04g1154 | Hepe-Chr4:66707519 | 2.86e-12 | transposed | |
Hepe05g2102 | Hepe-Chr5:71598058 | Hepe04g1154 | Hepe-Chr4:66707519 | 1.46e-47 | transposed | |
Hepe10g0780 | Hepe-Chr10:14879773 | Hepe04g1154 | Hepe-Chr4:66707519 | 4.66e-55 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55407 | PF03106 | WRKY | 9.20E-25 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1154 | - | - | - | 0.0 |