Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1199 ATGACTTCCCACCGAAACTTCTTGATCCTTATAATAATCGCAATTTTCTCGGCTTCTTTAACAATAGCCCAGACGTTAACGTCCTGCGGAACCGGGAATTCGGCTGAATTTGTACGATATCCGTTTGGATTCTCAAATTTGAGCCCAATTAGATTGGATTGCAGCAAAAATGGCGAGATTATTCAAATCGGGAGATTCCAGGTCCAGAACATTACTGAAAGGAGCATCCTCATCAAACTTCCTACAGATCAGTGCAATATCTCTATCGATTCGATTTCAAAACTGTTCGGTGAAAACTACAGTCCTACTCTCCGCAACAGTCTCCTCTTGAATTGTACCGAACAACCGATTCCATGCGGAATAATGGCCAATTTCGGCCAGAATCAGCTGAAGAACTGCGGCTTTAAGAACAATAATTTGAGCTGCTTCACTCAGACCGAGCAAACTGGATTTCTGCCCCATTTGAATAACTGCCGGTCTCTTTTGTCATCTGTATTCGTGAATTCTACATCAAAATCGACCTCTGTGTTCGAGGTCGAGTTCGGGGTCCTTGAATTAGAGTGGTGGCTCAAACCCTCGGCTTCCGTACGGTGCTCAAAAAATGCCAATGGCAAGGACATTACCAACTCGACGGACACCCTAGGATTCCGTTGCCAGTGCTTAGAAGGGTTCGAAGGAAATGCTTACGACGACGTCGGCTACGGCTGCCGGAGAGTTTCTCACCATTGCAATCCTTCAACATACATTACTGGCCGATGTGGAGGAGGCAAAGTCACTGCTCTAATTGCAGGTGTCTTTGTTGGAGCTTTTCTAATGGCTGTCCTGACCATTATCTGTTACTGCATCCGACGCCGCTCAATGTGTCTGAAAGGTCAGATGAGTGCAAAGCGGCTTCTAAGTGAGGCTGCTGGAAATTCCAGTGTTACTTTATATCCCTTCAAAGAAATAGAAAGAGCCACTAATGGCTTCTCTGAGAAACAGAGGCTGGGAACTGGAGCCTTTGGTACAGTCTATGCAGGAAGGCTTCATGAGGATGAGTGGGTTGCTGTAAAAAAGATCAAATATAGAGACCACAATAGCATTGACCAGGTCATGAATGAGATAAAACTACTCTCCTCGGTGAGCCACCCGAATCTAGTCCGCTTGCTTGGCTGCTGCATCGAAGGAGGCCAACAGATCCTTGTCTATGAGTTTATGCCCAATGGAACTCTCTCTCAACATCTTCAAAGAGAGCGTGGAACTGGCCTTCCATGGACGACAAGGCTCACCATTGCAGCCGAAACTTCTCGTGCAATAGCATACCTCCATTCTGCTGTACATCCACCAATATATCACAGAGACATCAAGTCGAGCAATATACTTCTGGATCATGGCTTCAAATCAAAAGTTGCAGATTTTGGTCTTTCTAGACTTGGTATGACAGAAATATCACACGTCTCAACAGCTCCACAAGGAACCCCGGGCTATGTTGACCCACAATACCATCAAAATTTCTATCTCTCAGATAAAAGCGACGTTTATAGTTTTGGAGTAGTCCTGGTAGAGATAATAACAGCATTGAAAGTGGTCGATTTCACTCGTCCCCAGAGTGAAGTAAACTTAGCTGCACTTGCCATTGATAGGATTGGGAGAGGTTCTGTGGATGAACTAATTGACCCTTTCCTCGAACCACATAGAGATGCTTGGACCCTCTACTCTATTCACAAGGTAGCTGAGCTTGCATTCAGATGCCTTGCTTTTCATAGCGACATGAGGCCTTCGATGATAGAAGTAGCAGAGGAACTGGAATGCATCAGACGCAGCGGGTGGACATCAATGGAGGAGCATTTTTGTGCAGCATCATCAGCAGGATCGGCTTGCTCATCTCCTCGTAGCGTAAGCGAGAGATCCATAAGTGGCATTACAATAAGCGGCATTACAATTAAGAAGGCCGGGCTGCTTTCAGGGCTGGGGAGCCAGAGATTGATAATTCCGCCGGAGAACAATCATCATAAGGACTATCTGCCTCCTGTAGAGGAGGTAATGGATAGTTCCCCAGTTTCCATACAGGATCCTTGGTTAAGTGAACAAAGCTCACCTTCAACAAATAGTTTATTGGGTAATGTAGTACGGTGA 2115 45.63 MTSHRNFLILIIIAIFSASLTIAQTLTSCGTGNSAEFVRYPFGFSNLSPIRLDCSKNGEIIQIGRFQVQNITERSILIKLPTDQCNISIDSISKLFGENYSPTLRNSLLLNCTEQPIPCGIMANFGQNQLKNCGFKNNNLSCFTQTEQTGFLPHLNNCRSLLSSVFVNSTSKSTSVFEVEFGVLELEWWLKPSASVRCSKNANGKDITNSTDTLGFRCQCLEGFEGNAYDDVGYGCRRVSHHCNPSTYITGRCGGGKVTALIAGVFVGAFLMAVLTIICYCIRRRSMCLKGQMSAKRLLSEAAGNSSVTLYPFKEIERATNGFSEKQRLGTGAFGTVYAGRLHEDEWVAVKKIKYRDHNSIDQVMNEIKLLSSVSHPNLVRLLGCCIEGGQQILVYEFMPNGTLSQHLQRERGTGLPWTTRLTIAAETSRAIAYLHSAVHPPIYHRDIKSSNILLDHGFKSKVADFGLSRLGMTEISHVSTAPQGTPGYVDPQYHQNFYLSDKSDVYSFGVVLVEIITALKVVDFTRPQSEVNLAALAIDRIGRGSVDELIDPFLEPHRDAWTLYSIHKVAELAFRCLAFHSDMRPSMIEVAEELECIRRSGWTSMEEHFCAASSAGSACSSPRSVSERSISGITISGITIKKAGLLSGLGSQRLIIPPENNHHKDYLPPVEEVMDSSPVSIQDPWLSEQSSPSTNSLLGNVVR 704
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 67263895 67268428 - Hsped.04g11990.1 Hepe04g1199 568337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1199 704 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Hepe04g1199 704 MobiDBLite consensus disorder prediction 681 704 - -
Hepe04g1199 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g1199 704 SMART serkin_6 323 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1199 704 Pfam Protein tyrosine and serine/threonine kinase 326 594 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g1199 704 ProSitePatterns Protein kinases ATP-binding region signature. 329 352 IPR017441 GO:0005524(InterPro)
Hepe04g1199 704 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 652 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Hepe04g1199 704 ProSiteProfiles Protein kinase domain profile. 323 598 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1199 704 FunFam Wall-associated receptor kinase-like 14 290 398 - -
Hepe04g1199 704 Gene3D Phosphorylase Kinase; domain 1 283 398 - -
Hepe04g1199 704 MobiDBLite consensus disorder prediction 679 704 - -
Hepe04g1199 704 FunFam Wall-associated receptor kinase-like 20 399 608 - -
Hepe04g1199 704 SUPERFAMILY Protein kinase-like (PK-like) 303 596 IPR011009 -
Hepe04g1199 704 Gene3D Transferase(Phosphotransferase) domain 1 399 614 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1199 Hepe-Chr4:67263895 Hepe05g0319 Hepe-Chr5:3943871 3.68e-88 dispersed
Hepe10g0684 Hepe-Chr10:9044214 Hepe04g1199 Hepe-Chr4:67263895 1.80e-200 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72742 PF07714 PK_Tyr_Ser-Thr 6.90E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1199 - - - 0.0