Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1212 ATGGCCGATTTCCAGACCTCAACTCAACGAGCCAAATGGATCTTGACTCCTCAGGAGCTGGTTGCCAGGTACAAAGCTGCTACCCAGAAAGCAATCGAAGCTCTGGAGAAGTTTGGAGCAGCACTAATGGAAGTAGATGCTGACGGATCATTGTCATATCCAGACCCTCAGATAAATTTAAAAGATAATGCTGACAAGCATTCTCGCCCTAAAGCTTTGAGTATTGAAGAAGAACAATTTATGCGAGTATTTTATGAAAACAAACTTCAAGAAGTATGCAACAATTTTCATTTTCCTCATAAAATCCAGGCAACAGCTCTTATATATTTTAAAAGATTCTATCTACAATGGTCTGTGATGCAACATAATCCCAAAAATGTGATGTTAACCTGCATTTATGCAGCTTGTAAGATAGAAGAAAATCACGTCTCAGCTGAGGAGCTTGGTAAGGGGATTTCACAGGATCATCAAATTATTCTCAATTATGAGATGATAGTTTATCAGAGTCTGGAATTTGATCTTATTGTTTATGCACCTTACCGATCAGTTGAAGGCTATGTAAATGATATGGAGGAACTCTTCAATGAGAATGCTGAAATGCTTCAAATGCTGAAGGAAACAGCATCATTAGAGGTTGATAAAATTTTGTTAACAGATGCCCCACTTCTCTTCCCTCCTGGGCAGTTAGCATTGGCTGCATTGCGCAAATCAAATGAAGTTCATGGAGTTATTGACTTCGAAAGATACGTGGATAGTATTCTCTCTCGCCAGAATTCTGCACATACCATTGCCGAGCTGTATGAGCTTTTAAATTCAATTGACTTATGGGTTAACAAATATGCATTCCCTTCAGAAAAGGATTTAAAGCACATCAACAGAAAATTAAAATCTTGTTGGGGACTGGGCTCCAATGACGAGAGTAAAAAAAGGGAGAAGAAATCAAAGCACAAATCAAAGAAGAGTTCGAATGAAATGCAAAATATGCCTTCGCACAATTAG 999 38.34 MADFQTSTQRAKWILTPQELVARYKAATQKAIEALEKFGAALMEVDADGSLSYPDPQINLKDNADKHSRPKALSIEEEQFMRVFYENKLQEVCNNFHFPHKIQATALIYFKRFYLQWSVMQHNPKNVMLTCIYAACKIEENHVSAEELGKGISQDHQIILNYEMIVYQSLEFDLIVYAPYRSVEGYVNDMEELFNENAEMLQMLKETASLEVDKILLTDAPLLFPPGQLALAALRKSNEVHGVIDFERYVDSILSRQNSAHTIAELYELLNSIDLWVNKYAFPSEKDLKHINRKLKSCWGLGSNDESKKREKKSKHKSKKSSNEMQNMPSHN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 67432036 67439030 + Hsped.04g12120.1 Hepe04g1212 568350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1212 332 CDD CYCLIN_AcCycH_rpt2 177 298 - -
Hepe04g1212 332 PANTHER CYCLIN 9 322 IPR043198 GO:0000079(PANTHER)|GO:0005634(PANTHER)|GO:0006357(InterPro)|GO:0006357(PANTHER)|GO:0016538(InterPro)|GO:0016538(PANTHER)|GO:0070816(PANTHER)|GO:0070985(PANTHER)
Hepe04g1212 332 SUPERFAMILY Cyclin-like 179 300 IPR036915 -
Hepe04g1212 332 Pfam Cyclin, N-terminal domain 72 174 IPR006671 -
Hepe04g1212 332 MobiDBLite consensus disorder prediction 299 332 - -
Hepe04g1212 332 FunFam Cyclin h 177 279 - -
Hepe04g1212 332 Gene3D - 177 279 - -
Hepe04g1212 332 SMART cyclin_7 87 168 IPR013763 -
Hepe04g1212 332 SUPERFAMILY Cyclin-like 67 176 IPR036915 -
Hepe04g1212 332 FunFam cyclin-H1-1 63 175 - -
Hepe04g1212 332 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Hepe04g1212 332 Pfam Cyclin C-terminal domain 179 273 IPR031658 -
Hepe04g1212 332 Gene3D - 63 175 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1212 K06634 - csv:101220754 594.734