Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1231 ATGAAGAATAACTCCTCCAAAGTTGTTGTTTTATTGCTTATAAGCTTCCTTTTGTTGAATCAGCTCCTTGTGTCCTCACAACTTGATTATAGGTTCTATGATGCCTCTTGTCCCAACCTAACAAGAATTGTCAGATATGGCGTTCGGATGGCAGTTTTTAATGATACTAGGATGGCTGCTTCTCTCTTACGCCTTCATTTTCATGATTGCTTTGTCAACGGCTGTGATGGATCAGTGTTGCTTGATGACACTAGCACATTTAGGGGGGAGAAAAATGCATTCCCGAATAAGAACTCGGCTCGAGGCTACGAGGTCATTGATAATATAAAGGCTATGCTAGAGAGAGCCTGTCCATCCGTCGTCTCGTGTACCGATATATTAACACTAGCTGCAAGAGAGGCTGTCTTTCTTGTTGGAGGACCATTTTGGTCCCTTCCACTTGGTCGCCGAGATGGCACGACAGCGAACGAGAGCGAGGCCAATCAGCTGCCATCACCAGTGGAGCCATTGGAGAATATAGTTGCAAAGTTCACTTCAAAAGGTCTTGATGTAAAGGATGTTGTTGTGCTCTCAGGTGCACACACTTTCGGATTTGCTCAGTGCATGATGTTCAAGCATAGGCTCTTCGACTTCGACGGCTCGGGAAATCCGGATCCAGAACTCGACGTGGTGCTGCGACAGAACTTACAGAGCATCTGTCCGAATCAAGATGAGTCCAACAACAAACTGGCTCCCTTGGACGCCTACACGACCAACAAGTTTGACAATGCTTATTACAGGAACTTGGTGAACAAGTTGGGAGTTCTGCAATCAGACCAAGCTCTGATGATAGACAATACAACTGCTCCTTTAGTGGTGAACTACAGCAGGTATCCATATCTGTTTTACAGGGACTTTGGAGCATCAATGGTGAAGCTGGCCAATACTGGGATCCTTACAGCTCAAAATGGGGAGATTAGGAAGAATTGCAGGCTGGTGAACTACTGA 987 45.69 MKNNSSKVVVLLLISFLLLNQLLVSSQLDYRFYDASCPNLTRIVRYGVRMAVFNDTRMAASLLRLHFHDCFVNGCDGSVLLDDTSTFRGEKNAFPNKNSARGYEVIDNIKAMLERACPSVVSCTDILTLAAREAVFLVGGPFWSLPLGRRDGTTANESEANQLPSPVEPLENIVAKFTSKGLDVKDVVVLSGAHTFGFAQCMMFKHRLFDFDGSGNPDPELDVVLRQNLQSICPNQDESNNKLAPLDAYTTNKFDNAYYRNLVNKLGVLQSDQALMIDNTTAPLVVNYSRYPYLFYRDFGASMVKLANTGILTAQNGEIRKNCRLVNY 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 67683678 67685174 + Hsped.04g12310.1 Hepe04g1231 568369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1231 328 PANTHER PEROXIDASE 72-RELATED 16 325 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 FunFam Peroxidase 164 306 - -
Hepe04g1231 328 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe04g1231 328 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 FunFam Peroxidase 31 179 - -
Hepe04g1231 328 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601(InterPro)
Hepe04g1231 328 Gene3D Peroxidase, domain 2 164 306 - -
Hepe04g1231 328 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 Pfam Peroxidase 44 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1231 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Hepe04g1231 328 Gene3D - 31 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1231 Hepe-Chr4:67683678 Hepe08g0082 Hepe-Chr8:648102 4.09e-110 dispersed
Hepe04g1231 Hepe-Chr4:67683678 Hepe08g0660 Hepe-Chr8:5913519 1.23e-88 wgd
Hepe04g1231 Hepe-Chr4:67683678 Hepe08g1063 Hepe-Chr8:10324944 2.34e-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1231 K00430 - csv:101218459 559.296