Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1263 | ATGGCCGTCGAGGTCTACCCACGACTCTCCCTCACCGAGAAGATGGAAGCCAACGCCGTTCAAGAAGCAGCTTCCGGCCTCGAAAGCGTCGAGAAACTCATCCGATTGCTCTCCAATTCCCAATCCACCTCCTTTCCCCCTTCTATTCAATCCCCTAATTCCACTCACTCCTCTAATTCAGATTTCCCCTCCGACTGCCGCGCCGCCGCCGATGCTGCCGTCTCCAAGTTCAAAAAGGTCATTTCTCTTCTGGGTCGGAGTCGGGTCGGCCATGCCCGCTTCAGAAGAGCTCCTCTCCCTCTTCCTCATACCCCCCAAGTCCACTACGCCACTCCCATCCAACAGATCCCCGCCGTCGACCTTCATAACAAACAGCCTCCCACTCTCAATTTCTCCTATTCCTCTGCCCATAACTCGTTCGTCTCCTCGTTGACCGGCGACGGCGACGGCGACACCAAGCAACCGTCCTCCTCGTCGGCTTTTCAGATTACCAACATGTCCCAAATCTCCTCCGCCGGAAAACCACCTCTCCTCAAGAGGAAGTGTAGCTCCGAAAACTTGGGATCCGGCAAGTGCGGCGCTGCTTCTTCCTCCGGCCGATGCCACTGTTCCAAGAAGAGGAAACTGAAGGTGAAGAGAGTTGTGAGAGTTCCGGCGATAAGCTTGAAATTGGCAGATATTCCACCGGACGATTATTCATGGAGAAAATATGGTCAAAAGCCCATTAAAGGGTCTCCACATCCCAGGGGTTATTACAAGTGTAGCAGTGTGAGAGGTTGCCCAGCCAGGAAACACGTAGAACGGGCCGTAGACGATCCGGCTATGCTAGTGGTCACATACGAAGGAGAACATAATCACACCCACCTCGCTCTACCCGAAACCACCAATCTCATTCTTGAGTCTTCCTAG | 909 | 53.8 | MAVEVYPRLSLTEKMEANAVQEAASGLESVEKLIRLLSNSQSTSFPPSIQSPNSTHSSNSDFPSDCRAAADAAVSKFKKVISLLGRSRVGHARFRRAPLPLPHTPQVHYATPIQQIPAVDLHNKQPPTLNFSYSSAHNSFVSSLTGDGDGDTKQPSSSSAFQITNMSQISSAGKPPLLKRKCSSENLGSGKCGAASSSGRCHCSKKRKLKVKRVVRVPAISLKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERAVDDPAMLVVTYEGEHNHTHLALPETTNLILESS | 302 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 68169831 | 68171190 | - | Hsped.04g12630.1 | Hepe04g1263 | 568401 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1263 | 302 | Pfam | WRKY DNA -binding domain | 230 | 286 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1263 | 302 | SMART | WRKY_cls | 228 | 288 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1263 | 302 | MobiDBLite | consensus disorder prediction | 142 | 162 | - | - | |
Hepe04g1263 | 302 | Pfam | Plant zinc cluster domain | 179 | 226 | IPR018872 | - | |
Hepe04g1263 | 302 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 19 | 290 | IPR044810 | GO:0003700(InterPro) | |
Hepe04g1263 | 302 | MobiDBLite | consensus disorder prediction | 42 | 63 | - | - | |
Hepe04g1263 | 302 | FunFam | WRKY transcription factor 65 | 212 | 289 | - | - | |
Hepe04g1263 | 302 | Gene3D | WRKY domain | 219 | 288 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1263 | 302 | ProSiteProfiles | WRKY domain profile. | 223 | 286 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe04g1263 | 302 | SUPERFAMILY | WRKY DNA-binding domain | 226 | 287 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g2055 | Hepe-Chr3:78089943 | Hepe04g1263 | Hepe-Chr4:68169831 | 3.97e-55 | dispersed | |
Hepe04g1263 | Hepe-Chr4:68169831 | Hepe06g1960 | Hepe-Chr6:70850247 | 5.87e-53 | dispersed | |
Hepe09g0437 | Hepe-Chr9:3944685 | Hepe04g1263 | Hepe-Chr4:68169831 | 4.86e-68 | transposed | |
Hepe01g1792 | Hepe-Chr1:82975299 | Hepe04g1263 | Hepe-Chr4:68169831 | 1.89e-75 | wgd | |
Hepe04g1263 | Hepe-Chr4:68169831 | Hepe08g1152 | Hepe-Chr8:11676588 | 2.49e-89 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55428 | PF03106 | WRKY | 3.80E-26 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1263 | - | - | - | 0.0 |