Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1268 ATGGATAATGGAACTTCTAATAGTTCAACACAATCTGCAGTCGACAATTCAGCTCCAACTGTCGAGACGCAAAATAGTAAAGGAGACCAATTGACATCTATTTTATCTACGTCTGGCATATCATCTTGGGCTAGGAGATTTAGAAATCCACAATCATCTGAAGCAGCAGAAAATGACTCTAAGGCAGGAAATGCTGGGATGTCAGCAATTGCTCGTTTCAGTAGTGGCTTTGGATTGCGGATACCTTCAATGTCTCCTGTACGAGACGATGGTATTGCAGATACCAAATCAGCAACGCAATCTGGTGTTTTCGAATCGATCACAAAAGGGTTAGTTGACACATCTCAGAATGCAGTTAAGGCTATGCAGGTAAAGGCACGCCATATGGTCTCTCAAAACAAACGAAGATATCAGGAAGGAGAATTTGATTTGGATATGACATATATCACTGAAAATATAATTGCTATGGGGTTTCCTGCTGGTCACATGAGCTCTGGTTTTTTTGGATTCCTTGAGGGATTTTATAGAAATCATATGGAAGAAGTGATCAAATTTTTTGAAACTCATCATAAGGGAAAATACAAAGTTTACAATCTTTGCTCAGAGCGTTTGTATGACGCCTCATTATTTGAGGGGAAGGTTGCACATTTCCCGTTTGATGATCATAATTGTCCTCCTATCCACCTCATAAAATCATTTTGTCAAAGTGCATATGCATGGTTAAAGGAGGATATTGAGAATGTGGTTGTTATTCATTGTAAAGCTGGTATGGCAAGAACAGGGCTAATGATTTGCAGCCTCCTTTTATTCCTAAAGTTCTTCCAAACATCAGCAGAGGCAATTGACTATTTTAATCAGAAAAGATGCGTGGATGGAAAGGCTTTGGTTCTTCCTAGTCAGATTAGGTATGTCAAGTATTATGAGCGCATTCTAACACATTTCAACGGAAATACTCCACCTGGACGGAGGTGCATGCTGAGAGGTTTCCGGCTTCACAACTGCCCGTACTGGGTTAGGCCATCCATTACAATATCAAATCACAGTGAGATTTTGTTCTCAACAAGAAAGCATCCAAAGACAAAGGATTTAATGCCAGAAGATTTCTGGATTAGGGCACCAAAGAAAGGATTTGTGGTCTTTGCACTGCCAGGTGAGCCTGGTTTGACAGAGTTGTCTGGAGACTTCAAGATTCATTTTCATGACCGGCATGGAGATTTTTACTGTTGGTTAAATACAACAATGACACAAAACAAGGTATTATTAAGTGACACAGATCTTGATGGTTTTGATAAGAGAAAACTTCCTACTCCTGGACTCCAGGTCGAAATTGTGATGATAGACTATGATGGTACTTTACCAACACGATTGAAAACTGGTTCTGCTGGCAAAGGATCTGATCGTCGCTCCCATGATCGGGGATCAGATCATGAAGCAGCACAATCCAGCAAAAATCAAATTCCCGAAGATGAAGAAAATGATGACAATGTATTCTCTGATAGTGATGAAGAAAATGGCGACACAAAAACCAGTCTAGCCCAATCAACTTCTGGAACTGCAGGAGCAGCTGACCATTCATCAACAACAATTGCTTCTGAAAGAATTGGGAGTTTAGCTCATTTGTCACTCGGGAATGAGAAAAACACACAAACAAGTGTTTCAACAGAACTAAACTTTGACGGTATGATACAATCGCCAGGCCTTGAGACCCCAAATTTGGATTCATTAAGAGCAAGTGACTTCAAGGCAATAGCAGCCGATGCGTCAGTTTTCACTTTTGGGGATGAAGAAGACTTTGATAGTGAATAG 1806 40.42 MDNGTSNSSTQSAVDNSAPTVETQNSKGDQLTSILSTSGISSWARRFRNPQSSEAAENDSKAGNAGMSAIARFSSGFGLRIPSMSPVRDDGIADTKSATQSGVFESITKGLVDTSQNAVKAMQVKARHMVSQNKRRYQEGEFDLDMTYITENIIAMGFPAGHMSSGFFGFLEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVAHFPFDDHNCPPIHLIKSFCQSAYAWLKEDIENVVVIHCKAGMARTGLMICSLLLFLKFFQTSAEAIDYFNQKRCVDGKALVLPSQIRYVKYYERILTHFNGNTPPGRRCMLRGFRLHNCPYWVRPSITISNHSEILFSTRKHPKTKDLMPEDFWIRAPKKGFVVFALPGEPGLTELSGDFKIHFHDRHGDFYCWLNTTMTQNKVLLSDTDLDGFDKRKLPTPGLQVEIVMIDYDGTLPTRLKTGSAGKGSDRRSHDRGSDHEAAQSSKNQIPEDEENDDNVFSDSDEENGDTKTSLAQSTSGTAGAADHSSTTIASERIGSLAHLSLGNEKNTQTSVSTELNFDGMIQSPGLETPNLDSLRASDFKAIAADASVFTFGDEEDFDSE 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 68209864 68214795 + Hsped.04g12680.1 Hepe04g1268 568406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1268 601 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 120 317 - -
Hepe04g1268 601 ProSiteProfiles Phosphatase tensin-type domain profile. 135 314 IPR029023 -
Hepe04g1268 601 Gene3D Protein tyrosine phosphatase superfamily 120 317 IPR029021 -
Hepe04g1268 601 MobiDBLite consensus disorder prediction 1 34 - -
Hepe04g1268 601 MobiDBLite consensus disorder prediction 461 490 - -
Hepe04g1268 601 SMART PTEN_C2_2 319 447 IPR014020 -
Hepe04g1268 601 ProSitePatterns Tyrosine specific protein phosphatases active site. 251 261 IPR016130 GO:0016311(InterPro)
Hepe04g1268 601 Pfam PTEN2, C2 domain 321 449 - -
Hepe04g1268 601 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 214 269 - -
Hepe04g1268 601 CDD PTP_PTEN 145 310 IPR045101 GO:0016791(InterPro)
Hepe04g1268 601 ProSiteProfiles C2 tensin-type domain profile. 321 448 IPR014020 -
Hepe04g1268 601 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 249 288 IPR000387 GO:0016311(InterPro)
Hepe04g1268 601 MobiDBLite consensus disorder prediction 507 527 - -
Hepe04g1268 601 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 122 522 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Hepe04g1268 601 MobiDBLite consensus disorder prediction 454 527 - -
Hepe04g1268 601 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 148 315 IPR029021 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2078 Hepe-Chr2:51911721 Hepe04g1268 Hepe-Chr4:68209864 3.05e-43 dispersed
Hepe02g0602 Hepe-Chr2:6253950 Hepe04g1268 Hepe-Chr4:68209864 6.85e-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1268 K01110 - csv:101213277 1042.72