Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g1278 | ATGGAAGAATTAGCCACTTACTTCCTCTACTCTTCCCTATCTCTTCTCTTTCTTCTTTTTGCTTTCAATCTCATCCGTCGTCGATACCTTCGATTTCACAAAAACTTACCGCCGAGTCCGCCCTCCCTTCCGATCATCGGCCATCTCCATCTCTTGAAAAAACCGATCCATCGAAATTTCCAAAAACTCTCCGCCAAATACGGCCCTGTTATGTCTCTCCGCCTCGGTTCTCGCCTTGCAGTCGTCGTATCATCTCCGTCAGCAGTGGAGGAATGCTTCACTAAAAACGACGTCGTCCTCGCCAATCGTCCTCGCTTGCTAGTCGGGAAATACCTCGGCTACAACTACACTACCATGATTGGGGCTTCGTACAACGACCATTGGCGGAACCTCCGCCGAATCGGCGCCATCGAAATCTTCTCTTCATCTCGAATCAACAAATTCGCTGATATCCGGAAGGATGAAGTGGAGCGATTGGTGCGGAAACTGTCGCGCAATTCGATCCATCAATTCTCGAAAGTAGAGATGCAATCGGCGTTGTCGGAGCTAACGTTCAATATCTCGATGAGAATGATGGCCGGGAAGAGGTATTACGGCGATGACGTGACATACGTGGAAGAGGCGGGGAAGTTCAGGCAGATGTTTAAGCAGAATGTAGCGTTAGGAGGAGTATCAAATCCTGGGGATTTTTTCCCCATTCTGAACTGGATTTCGAAGGGTTTCGAGAAGACATTGATTGAGTTTGGGAAGAAAATGGATGCGCTCTTGCAGGGGCTGATCGACGACCACCGGAGGGAGAAGGAAAAGGGAAAAAATACCATGATCGATCACCTGCTCTCTCTACAAGAATCGGAGCCCGCTCACTACAACGATCAAATTATCAAAGGATTTATACTGGTGATATTGACCGCGGGGACCGACACATCATCAGTGACGATGGAATGGGCCTTATCTCATCTATTGAACAACCCCGAAGCGTTAAAGATAGCAAAAGACGAACTCGACATTCAAGTTGGACAAGAACGACTAGTTGAAGAACGAGACATATCCAAACTACCATATCTTCAAGGAATCATCTCCGAGACTCTTCGGTTAACTCCTGCCGCTCCGATGTTGCTGCCCCATTACGCATCCAACGATTGCACAATATGTGGATATGATGTGCCACGTGACACAATGATACTAGTTAATGCATGGGCCATACATAGGGATCCAAATGAATGGGAGGAGCCAACAAGTTTCAAACCAGAACGATATGAAAAGTCAGAAGTGGAACCACACAAGTTGGTACCTTTCGGAGTAGGGAGGCGAGCTTGTCCGGGAGCTGCCATGGCGCAAAGGGTGATGAGTCTAACTTTGGCGACATTAATTCAGTGCTTCGAGTGGGAGAGAATAGGAAAAGAAGACGTAGACATGAACGAGAGGGTGGGTGGCACAATGACCAAAATTGTGCCATTGGAGGCCATGTGCAAAGCTCGTCCCATCATAAAAAACCTTCTTCACTGA | 1506 | 47.68 | MEELATYFLYSSLSLLFLLFAFNLIRRRYLRFHKNLPPSPPSLPIIGHLHLLKKPIHRNFQKLSAKYGPVMSLRLGSRLAVVVSSPSAVEECFTKNDVVLANRPRLLVGKYLGYNYTTMIGASYNDHWRNLRRIGAIEIFSSSRINKFADIRKDEVERLVRKLSRNSIHQFSKVEMQSALSELTFNISMRMMAGKRYYGDDVTYVEEAGKFRQMFKQNVALGGVSNPGDFFPILNWISKGFEKTLIEFGKKMDALLQGLIDDHRREKEKGKNTMIDHLLSLQESEPAHYNDQIIKGFILVILTAGTDTSSVTMEWALSHLLNNPEALKIAKDELDIQVGQERLVEERDISKLPYLQGIISETLRLTPAAPMLLPHYASNDCTICGYDVPRDTMILVNAWAIHRDPNEWEEPTSFKPERYEKSEVEPHKLVPFGVGRRACPGAAMAQRVMSLTLATLIQCFEWERIGKEDVDMNERVGGTMTKIVPLEAMCKARPIIKNLLH | 501 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 68346706 | 68349968 | - | Hsped.04g12780.1 | Hepe04g1278 | 568416 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g1278 | 501 | CDD | CYP81 | 68 | 486 | - | - | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 293 | 310 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 439 | 462 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 356 | 374 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 313 | 339 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 429 | 439 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 397 | 421 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | E-class P450 group I signature | 183 | 201 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | P450 superfamily signature | 430 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | P450 superfamily signature | 357 | 368 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | P450 superfamily signature | 439 | 450 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PRINTS | P450 superfamily signature | 304 | 321 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | PANTHER | CYTOCHROME P450 82C3-RELATED | 16 | 493 | IPR050651 | - | |
| Hepe04g1278 | 501 | FunFam | Cytochrome P450 family protein | 29 | 496 | - | - | |
| Hepe04g1278 | 501 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 432 | 441 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe04g1278 | 501 | Gene3D | Cytochrome P450 | 25 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | Pfam | Cytochrome P450 | 37 | 481 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1278 | 501 | SUPERFAMILY | Cytochrome P450 | 37 | 493 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe04g1278 | Hepe-Chr4:68346706 | Hepe08g1167 | Hepe-Chr8:11924291 | 5.42e-203 | dispersed | |
| Hepe04g1276 | Hepe-Chr4:68311447 | Hepe04g1278 | Hepe-Chr4:68346706 | 1.45e-250 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g1278 | K13260 | - | csv:101215449 | 771.541 |