Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1278 ATGGAAGAATTAGCCACTTACTTCCTCTACTCTTCCCTATCTCTTCTCTTTCTTCTTTTTGCTTTCAATCTCATCCGTCGTCGATACCTTCGATTTCACAAAAACTTACCGCCGAGTCCGCCCTCCCTTCCGATCATCGGCCATCTCCATCTCTTGAAAAAACCGATCCATCGAAATTTCCAAAAACTCTCCGCCAAATACGGCCCTGTTATGTCTCTCCGCCTCGGTTCTCGCCTTGCAGTCGTCGTATCATCTCCGTCAGCAGTGGAGGAATGCTTCACTAAAAACGACGTCGTCCTCGCCAATCGTCCTCGCTTGCTAGTCGGGAAATACCTCGGCTACAACTACACTACCATGATTGGGGCTTCGTACAACGACCATTGGCGGAACCTCCGCCGAATCGGCGCCATCGAAATCTTCTCTTCATCTCGAATCAACAAATTCGCTGATATCCGGAAGGATGAAGTGGAGCGATTGGTGCGGAAACTGTCGCGCAATTCGATCCATCAATTCTCGAAAGTAGAGATGCAATCGGCGTTGTCGGAGCTAACGTTCAATATCTCGATGAGAATGATGGCCGGGAAGAGGTATTACGGCGATGACGTGACATACGTGGAAGAGGCGGGGAAGTTCAGGCAGATGTTTAAGCAGAATGTAGCGTTAGGAGGAGTATCAAATCCTGGGGATTTTTTCCCCATTCTGAACTGGATTTCGAAGGGTTTCGAGAAGACATTGATTGAGTTTGGGAAGAAAATGGATGCGCTCTTGCAGGGGCTGATCGACGACCACCGGAGGGAGAAGGAAAAGGGAAAAAATACCATGATCGATCACCTGCTCTCTCTACAAGAATCGGAGCCCGCTCACTACAACGATCAAATTATCAAAGGATTTATACTGGTGATATTGACCGCGGGGACCGACACATCATCAGTGACGATGGAATGGGCCTTATCTCATCTATTGAACAACCCCGAAGCGTTAAAGATAGCAAAAGACGAACTCGACATTCAAGTTGGACAAGAACGACTAGTTGAAGAACGAGACATATCCAAACTACCATATCTTCAAGGAATCATCTCCGAGACTCTTCGGTTAACTCCTGCCGCTCCGATGTTGCTGCCCCATTACGCATCCAACGATTGCACAATATGTGGATATGATGTGCCACGTGACACAATGATACTAGTTAATGCATGGGCCATACATAGGGATCCAAATGAATGGGAGGAGCCAACAAGTTTCAAACCAGAACGATATGAAAAGTCAGAAGTGGAACCACACAAGTTGGTACCTTTCGGAGTAGGGAGGCGAGCTTGTCCGGGAGCTGCCATGGCGCAAAGGGTGATGAGTCTAACTTTGGCGACATTAATTCAGTGCTTCGAGTGGGAGAGAATAGGAAAAGAAGACGTAGACATGAACGAGAGGGTGGGTGGCACAATGACCAAAATTGTGCCATTGGAGGCCATGTGCAAAGCTCGTCCCATCATAAAAAACCTTCTTCACTGA 1506 47.68 MEELATYFLYSSLSLLFLLFAFNLIRRRYLRFHKNLPPSPPSLPIIGHLHLLKKPIHRNFQKLSAKYGPVMSLRLGSRLAVVVSSPSAVEECFTKNDVVLANRPRLLVGKYLGYNYTTMIGASYNDHWRNLRRIGAIEIFSSSRINKFADIRKDEVERLVRKLSRNSIHQFSKVEMQSALSELTFNISMRMMAGKRYYGDDVTYVEEAGKFRQMFKQNVALGGVSNPGDFFPILNWISKGFEKTLIEFGKKMDALLQGLIDDHRREKEKGKNTMIDHLLSLQESEPAHYNDQIIKGFILVILTAGTDTSSVTMEWALSHLLNNPEALKIAKDELDIQVGQERLVEERDISKLPYLQGIISETLRLTPAAPMLLPHYASNDCTICGYDVPRDTMILVNAWAIHRDPNEWEEPTSFKPERYEKSEVEPHKLVPFGVGRRACPGAAMAQRVMSLTLATLIQCFEWERIGKEDVDMNERVGGTMTKIVPLEAMCKARPIIKNLLH 501
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 68346706 68349968 - Hsped.04g12780.1 Hepe04g1278 568416
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1278 501 CDD CYP81 68 486 - -
Hepe04g1278 501 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 PANTHER CYTOCHROME P450 82C3-RELATED 16 493 IPR050651 -
Hepe04g1278 501 FunFam Cytochrome P450 family protein 29 496 - -
Hepe04g1278 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe04g1278 501 Gene3D Cytochrome P450 25 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 Pfam Cytochrome P450 37 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe04g1278 501 SUPERFAMILY Cytochrome P450 37 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1278 Hepe-Chr4:68346706 Hepe08g1167 Hepe-Chr8:11924291 5.42e-203 dispersed
Hepe04g1276 Hepe-Chr4:68311447 Hepe04g1278 Hepe-Chr4:68346706 1.45e-250 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1278 K13260 - csv:101215449 771.541