Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1303 ATGGGTCGCTTCAATCTCCTAATTGCACTCTCTCTTCTTTCTCTCTTCTTCTTCCCTTCCCCCACACTCGCCCAACTCCGACAAAACTTCTACTCCAACATCTGCCCCAATGTCGAAAACATTGTCCGCAACGAAGTTAACAAAAAATTTCAACAAACATTTGTCACTATTCCGGCCACTCTCCGCCTCTTCTTCCATGATTGCTTTGTTCAGGGATGTGATGCTTCGGTGATTATTGCTTCCACCGCATCCAACAAGGCCGAGAAGGACCATTCCGATAACCTCTCGCTTGCCGGAGATGGATTCGACACCGTCATCAAGGCTAAAGCCGCCCTCGACGCCATCCCTCAATGCCGTAACCGAGTCTCCTGCGCCGATATTCTCACTATGGCCACAAGAGACGTCGTCGCATTGTCCGGCGGACCGTCGTACGCGGTGGAGCTAGGAAGATTAGACGGCTTGGTTTCAAGAGCCTCCGATGTGGACGGGAAACTCCCAGCGCCAACCTTTAATCTCAATCAGCTCAATTCTCTGTTTGCTGCTAATGGCCTTACCCAACAGGACATGATCGCTCTCTCAGCGGCTCACACTCTCGGATTCTCGCACTGTGGAAAATTCTCGAACCGAATTTACAGCTTTACCCCTCAGAACCCAGTGGACCCATCACTAAACAGAACCTATGCAACCCAGCTACAAGGGATGTGCCCGAAGAATGTGGACCCCAGAGTGGCGATTAACATGGACCCAATCACGCCAAGAACATTTGACAACGTGTACTTTAAAAATCTCCAGCAAGGAATGGGCCTGTTCACTTCGGACCAGGTTTTGTTCACCGACACCAGGTCCAGGCCCACAGTCAACACGTGGGCCACCAACTCACAGGCCTTTAATAAAGCCTTTATTGATGCCATGACTAAGTTGGGCCGGGTCGGAGTCAAGAGCGGTACAAACGGTAATATCCGACGCGATTGTGGAGCTTTCAACTAA 987 50.66 MGRFNLLIALSLLSLFFFPSPTLAQLRQNFYSNICPNVENIVRNEVNKKFQQTFVTIPATLRLFFHDCFVQGCDASVIIASTASNKAEKDHSDNLSLAGDGFDTVIKAKAALDAIPQCRNRVSCADILTMATRDVVALSGGPSYAVELGRLDGLVSRASDVDGKLPAPTFNLNQLNSLFAANGLTQQDMIALSAAHTLGFSHCGKFSNRIYSFTPQNPVDPSLNRTYATQLQGMCPKNVDPRVAINMDPITPRTFDNVYFKNLQQGMGLFTSDQVLFTDTRSRPTVNTWATNSQAFNKAFIDAMTKLGRVGVKSGTNGNIRRDCGAFN 328
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 68627512 68629379 + Hsped.04g13030.1 Hepe04g1303 568441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1303 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Hepe04g1303 328 Gene3D Peroxidase, domain 2 166 307 - -
Hepe04g1303 328 Gene3D - 29 328 - -
Hepe04g1303 328 FunFam Peroxidase 166 307 - -
Hepe04g1303 328 SUPERFAMILY Heme-dependent peroxidases 25 328 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 CDD secretory_peroxidase 25 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe04g1303 328 FunFam Peroxidase 29 174 - -
Hepe04g1303 328 Pfam Peroxidase 42 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 ProSiteProfiles Plant heme peroxidase family profile. 25 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1303 328 PANTHER - 13 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g3402 Hepe-Chr2:83480169 Hepe04g1303 Hepe-Chr4:68627512 1.68e-144 dispersed
Hepe02g3403 Hepe-Chr2:83485157 Hepe04g1303 Hepe-Chr4:68627512 8.80e-147 dispersed
Hepe04g1303 Hepe-Chr4:68627512 Hepe07g2248 Hepe-Chr7:66877944 3.69e-92 dispersed
Hepe01g2085 Hepe-Chr1:85482829 Hepe04g1303 Hepe-Chr4:68627512 2.03e-139 transposed
Hepe10g1419 Hepe-Chr10:50858904 Hepe04g1303 Hepe-Chr4:68627512 4.48e-182 transposed
Hepe10g1377 Hepe-Chr10:50136096 Hepe04g1303 Hepe-Chr4:68627512 7.08e-56 wgd
Hepe04g1303 Hepe-Chr4:68627512 Hepe08g0687 Hepe-Chr8:6189940 3.06e-61 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1303 K00430 - csv:101206860 590.112