Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1304 ATGATGCAATTCAGCCAGACTCCCCCACGGTTGCACCAAACCACCGCCACCACTAGGATTATTTCTTCTTCATTTGATCATCCAGATATCACTCCTTCAATAATGAATAATAAAACAACGACGACAACAACAACCACGACGGCTAGACGCCCATGGCCTGGTCATGGTCATGCTCATGCTGGATTATTATTCCCTTTTTCCTCAAAGGCAACTTTGGGAAGTTGTTTGGGTGATGCCAATTGCATGGAACAGTTATTAATTCACTGTGCCAACGCCATTGAATCCAACGACGCCACTCTTGCCCAACAAATCCTTTGGGTCCTAAACAACATTGCCCCTCCCGACGGCGACTCGAATCAACGCCTCACTTCCGCCTTCCTACGCGCTCTCGTCACACGCGCCACCAACACCGGCAGCTGCAAGATCCTCACCCCCATCACCTCCTCCACTTCCTCCCTCACCACCCATACCTTCTCCCTCATGGACCTCGCCGCCTTCGTCGATTTAACCCCTTGGCACCGCTTTGGCTTCACCGCTGCCAATGCCGCCATTCTCGACGCTATCGACGGTTACTCATCCGTTCACATAATCGACTTCAGCCTTATGCATTGCATGCAAATCCCCACTCTCATCGACGCCATCGCTACTCGCTTCGAGGTCCCTCCTCTACTCAAACTCACCACCGTCGCCTCCGTAAAAGACGCGCCGCCCGTGCTGGACCTGTCGTACGACGAATTAGGTGCGAAATTGATGAACTTCGCGAGGTCTAAAAACGTGAGTATGGAATTTAGAGTGGTCCCGTCTTGTTACACAGATGGTTACGCCAACTTAATCGAACAAATCCGTGTGCAACATTTAATTTACGGAGCCGAAAGTCACGAAGCGCTCGTTTTCAACTGCCACATGATGCTCCATTACATCCCCGAAGAATCGCAATCTCCCAATTCCAATTACGACATGTCGTCGTGTGCTTCAATTCGATCCATTTTTCTGAAGGAAATCCGCAGCTTAGATCCAACGGTGGTGATTCTAATCGACGAAGATGCGGATTTGACGTCGAGTAAATTGGTTAGCCGATTGAGATCGGCGTTTAATTACCTGTGGATTCCGTACGACTCGATGGATTCGTTTGTGCCTCGGAGCAGCAAGCAGAGGGAATGGTACGAGGCCGACATTTGCTGGAAGATTGAGAATGTGATTGCTCACGAAGGGATTCAAAGAGTGGAGAGATTGGAGCCAAAGGGGCGCTGGATTCAACGGATGGTCAACGCCAAATTCCGAGGGGTTCCGTTCGGAGACGACGCCGTTTCGGAGGTGAAGACGATGCTGGACGAGCATGCAGCCGGATGGGGGCTCAAGAAGGATGATGACCACCTCCTCCTCACTTGGAAAGGCCACCACGTCGTTTTCGCCACCGCTTGGGTACCTTCATAA 1434 51.12 MMQFSQTPPRLHQTTATTRIISSSFDHPDITPSIMNNKTTTTTTTTTARRPWPGHGHAHAGLLFPFSSKATLGSCLGDANCMEQLLIHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALVTRATNTGSCKILTPITSSTSSLTTHTFSLMDLAAFVDLTPWHRFGFTAANAAILDAIDGYSSVHIIDFSLMHCMQIPTLIDAIATRFEVPPLLKLTTVASVKDAPPVLDLSYDELGAKLMNFARSKNVSMEFRVVPSCYTDGYANLIEQIRVQHLIYGAESHEALVFNCHMMLHYIPEESQSPNSNYDMSSCASIRSIFLKEIRSLDPTVVILIDEDADLTSSKLVSRLRSAFNYLWIPYDSMDSFVPRSSKQREWYEADICWKIENVIAHEGIQRVERLEPKGRWIQRMVNAKFRGVPFGDDAVSEVKTMLDEHAAGWGLKKDDDHLLLTWKGHHVVFATAWVPS 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 68641051 68642500 - Hsped.04g13040.1 Hepe04g1304 568442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1304 477 Pfam GRAS domain family 82 474 IPR005202 -
Hepe04g1304 477 MobiDBLite consensus disorder prediction 1 50 - -
Hepe04g1304 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 67 474 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe04g1304 477 MobiDBLite consensus disorder prediction 1 52 - -
Hepe04g1304 477 ProSiteProfiles GRAS family profile. 73 475 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1304 Hepe-Chr4:68641051 Hepe04g1315 Hepe-Chr4:68769049 1.96e-50 dispersed
Hepe04g1304 Hepe-Chr4:68641051 Hepe02g0199 Hepe-Chr2:2036986 2.71e-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55430 PF03514 GRAS 1.90E-93 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1304 - - - 0.0