Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1316 ATGGGGAAGAAACAGCACAGTAAAGACCGTTTGTTTATTACGAAAACTGAATGGGCAACCGAATGGGGTGGCGCCAAACCCAAGGATTCGCAAACCCCTTTCAAACGCCTTCCTTTCTATTGCTGCGCGCTTACATTTACACCCTTCGAGGACCCTGTATGTACCGCCGATGGCAACGTATTCGAGATAATGAATATCATCCCTTATATTCGAAAGTATGGTAAAAGTCCTGTTACTGGAGCTCCCCTGAAGCAGGAGGATATAATTCCACTTATTTTCCACAAGAATTCTGAAGGCGAGTTCCAGTGCCCTGTACTGAACAAAGTTTTTACCGAGTTCACTCACATAGTTGCTATAAAGACCACTGGAAATGTCTTCTGCTACGAGGCAATTAAAGAATTAAATATCAAGACAAAAAACTGGAAGGAACTTCTCACTGATGAACCATTTAGTAGGGAAGATATTATAACCATTCAGAACCCTACTGCGCTTGATAGTAAGGTTCTCCTGGATTTTGATCATGTGAAAAATAGCCTGAAAGTTGATGATGAAGAATCCCAGAAAATGAAATCAGATCCAACATATAACATAAATGTGTCGGGGGACATCAAGCAGATGCTGCTGGAACTTGGAACCGAAAAAGGAAAGCAAACTGCACTTCTTGGGGGAGGTGGTGGCAAGGCACAGAAAGAAAGGGCGGCTGCACTTGCTGCAATTTTAGCTGCTAGGTCACGCATTAAAGAAGATACCAAGGAAAATGCAAAAGGAGAGGAGAAACCTACTCAGGCATTCAGTATTGTGGATGCTGCATCTGCTTCAGTTCATGGAAGAAGTGCAGCTGCTGCGAAAGCTGCATCAAGTGACAAAACTGCTGCTCGAATTGCGATGCACATGGCGGGTGAGAGGGCACCCGTGAATGCTAAGATGGTAAAGAGTCGTTACACTACTGGTGCTACATCCCGATCCTTCACATCTACAGCTTACGATCCTGTTACAAAGAATGAACATGAATATATCAAGGTTGAGAAAAATCCAAAGAAGAAAGGATACGTACAGTTGCATACAACACATGGAGATTTGAATATTGAGCTGCATTGTGATATTACTCCAAGGACATGTGAGAATTTCATCACACTTTGTGAAAATGGCTACTACAATGGAGTTGCTTTTCATAGAAGTATTAGGAATTTTATGATTCAAGGTGGTGATCCAACCGGTACTGGAAGAGGGGGTGAATCTATTTGGGGAAAGCCCTTCAAAGATGAACTCAACTCCAAGTTGGTGCATTCTGGAAGGGGTATTGTCAGTATGGCAAATAGTGGTCCCCACACTAATGGTTCCCAATTCTTTATTCTGTACAAATCTGCCAATCACTTAAACTTCAAGCATACTGTATTTGGAGGTGTTGTTGGCGGTTTGACTGCTTTGGCAGCAATGGAAAAGGTTCCTGTTGATGACAATGATCGACCTCTGGAGGAGATCAAGATAACAAGTGTCTCAGTTTTTGTCAATCCATACTCAGAACCCGATGAAGAAGAGGAAGGAAAGCAAAAAGACGAGAAGATAGATGAAGAAAACGATAAGGTTGGATCATGGTATAGTAACCCAGGCACCGGGGCAGCTGAAAACGGAGCTGCTGGTGGTGGAGTAGGGAAATATCTGAAAGCAAAGAATGCCCAATCCAAATCCCCTCCTGTTGATCATAGTCTAAAAGAAACTACCTCGACCAAGAAAAGAACAGCCGCAGGTGAATTCAAAGACTTCTCTTCGTGGTAA 1776 42.96 MGKKQHSKDRLFITKTEWATEWGGAKPKDSQTPFKRLPFYCCALTFTPFEDPVCTADGNVFEIMNIIPYIRKYGKSPVTGAPLKQEDIIPLIFHKNSEGEFQCPVLNKVFTEFTHIVAIKTTGNVFCYEAIKELNIKTKNWKELLTDEPFSREDIITIQNPTALDSKVLLDFDHVKNSLKVDDEESQKMKSDPTYNINVSGDIKQMLLELGTEKGKQTALLGGGGGKAQKERAAALAAILAARSRIKEDTKENAKGEEKPTQAFSIVDAASASVHGRSAAAAKAASSDKTAARIAMHMAGERAPVNAKMVKSRYTTGATSRSFTSTAYDPVTKNEHEYIKVEKNPKKKGYVQLHTTHGDLNIELHCDITPRTCENFITLCENGYYNGVAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDELNSKLVHSGRGIVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTALAAMEKVPVDDNDRPLEEIKITSVSVFVNPYSEPDEEEEGKQKDEKIDEENDKVGSWYSNPGTGAAENGAAGGGVGKYLKAKNAQSKSPPVDHSLKETTSTKKRTAAGEFKDFSSW 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 68776754 68780538 - Hsped.04g13160.1 Hepe04g1316 568454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1316 591 SUPERFAMILY RING/U-box 37 104 - -
Hepe04g1316 591 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 385 402 IPR020892 GO:0003755(InterPro)|GO:0006457(InterPro)
Hepe04g1316 591 FunFam Peptidyl-prolyl cis-trans isomerase cyp65 331 515 - -
Hepe04g1316 591 ProSiteProfiles U-box domain profile. 35 108 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe04g1316 591 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 350 501 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe04g1316 591 SUPERFAMILY Cyclophilin-like 350 512 IPR029000 -
Hepe04g1316 591 FunFam Peptidyl-prolyl cis-trans isomerase 2 41 96 - -
Hepe04g1316 591 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 354 501 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe04g1316 591 Gene3D - 329 515 IPR029000 -
Hepe04g1316 591 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED 339 507 IPR044666 GO:0000209(PANTHER)|GO:0061630(PANTHER)|GO:0071013(PANTHER)
Hepe04g1316 591 MobiDBLite consensus disorder prediction 505 591 - -
Hepe04g1316 591 CDD cyclophilin_RING 350 508 - -
Hepe04g1316 591 Pfam Rtf2 RING-finger 38 191 - -
Hepe04g1316 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 390 402 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe04g1316 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 448 460 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe04g1316 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 364 379 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe04g1316 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 433 448 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe04g1316 591 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 461 476 IPR002130 GO:0000413(InterPro)|GO:0003755(InterPro)
Hepe04g1316 591 MobiDBLite consensus disorder prediction 509 528 - -
Hepe04g1316 591 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 40 95 IPR013083 -
Hepe04g1316 591 SMART Ubox_2 39 101 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Hepe04g1316 591 CDD RING-Ubox_PPIL2 38 110 IPR026951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1316 Hepe-Chr4:68776754 Hepe09g1485 Hepe-Chr9:35233318 2.96e-33 dispersed
Hepe01g1898 Hepe-Chr1:83821181 Hepe04g1316 Hepe-Chr4:68776754 3.63e-41 transposed
Hepe05g0401 Hepe-Chr5:4964862 Hepe04g1316 Hepe-Chr4:68776754 1.71e-50 transposed
Hepe05g1885 Hepe-Chr5:69193531 Hepe04g1316 Hepe-Chr4:68776754 1.21e-56 transposed
Hepe06g1234 Hepe-Chr6:62075521 Hepe04g1316 Hepe-Chr4:68776754 1.41e-43 transposed
Hepe04g1316 Hepe-Chr4:68776754 Hepe08g0727 Hepe-Chr8:6542293 1.73e-28 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1316 K10598 - csv:101204462 1024.23