Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1321 ATGGAAAGGTTTTTGGAGGAGAATTTTGGGGGCGTCAAACCGAAAAACTCGTCTGAGGAGGTGCTGCAGAGATGGAGGGAGCTTTGTGGAGTGGTCAAGAACCCCAAACGGAGGTTTCGATTCACCGCCAATCTCTCCAAGCGTGGCGAAGCTGCTGCTATGCGCCAGAATAATCAGGAGAAGTTGAGGATCGCAGTTTTAGTCTCAAAAGCAGCATTTCAATTCATCCAAGGTGTGCAACCAAGTGATTATACTGTTCCGGAGGATGTCAAAGCTGCAGGTTTCCATATTTGTGCTGAGGAACTCGGGTCTATTGTTGAAGGCCATGATACAAAGAAGTTTAAATTTCATGGTGGGGTTGAAGGGATTGCTGGGAAGCTCTGTACATCAACAACAAATGGGCTTGAGGGTGATGCTGATGCACTCAACCGTAGGCAAGAGCTTTTTGGAGTTAATAAATTTGCTGAGAGCGAACAGAGGAGTTTCATGGTGTTCGTTTGGGAGGCCCTCCAAGACATGACTCTCATGATCCTTGGACTCTGTGCTTTCGTCTCTTTGGTGGTTGGCATAATAACAGAAGGATGGCCACATGGGGCTCACGATGGCCTTGGAATTGTTGCCAGTATATTATTGGTTGTATTTGTCACAGCTACTAGTGACTATCGACAATCCTTGCAGTTCAAGGACTTGGATAAGGAGAAAAAGAAGATATCAATTCAGGTTACAAGGAACGGTTATAGACAGAAAATGTCCATCTACGATCTACTTCCTGGAGATGTTGTACACCTGTCTATTGGGGATCAAGTCCCTGCAGATGGACTATTTGTTTCAGGGTTTTCTGTTTTGATTGATGAGTCAAGTTTGACTGGAGAAAGTGAGCCAGTGATGGTGAGTGCAGAAAACCCTTATCTTCTTTCAGGAACTAAAGTTCAAGATGGATCCTGCAAGATGATTGTCACTACTGTTGGGATGAGAACCCAATGGGGTAAGTTGATGGCCACTCTTAGTGAAGGTGGAGATGATGAAACTCCATTGCAGGTGAAATTGAATGGAGTGGCAACAATTATTGGGAAAATAGGTCTTTTCTTTGCCATCATCACTTTCGCTGTGTTGGTTCAAGGATTGCTTACCCGTAAACTCAGAGAAGGGAGCCAGTGGAGCTGGTCTGGAGATGAAGCATTAGAGATATTGGAGTTCTTTGCTGTTGCAGTCACAATTGTTGTTGTTGCTGTGCCAGAGGGGCTTCCTTTGGCTGTGACATTAAGTCTTGCCTTTGCCATGAAGAAAATGATGAATGATAAAGCACTTGTCCGTCACCTGGCAGCTTGTGAAACTATGGGGTCTGCCACAAGTATTTGTAGTGACAAAACTGGAACAATCACTACAAATCGCATGACAGTAGTCAAATCATGCATTTGCATGAATGTTAAGGAATCAAGTAACAACGCATCAGACTTCTGTTCTGATCTTCCAGCCTCTGTTGTCAAACTTATGCTACAATCAATATTCAACAACACTGGGGGAGAAGTTGTAATCAACAAAGAGGGCAAACGTGAGTTGTTGGGCACTCCCACTGAGACTGCATTATTACAGTTTGCTCTCTCACTTGGTGGGGATTTTCAGGCCGAGAGACAGGCAGGTAAACTTATTAAAGTTGAGCCGTTCAACTCTTTGAAAAAGCGAATGGGTGTTGTCCTACAATTTCCTGAAGGAGGTTTCCGTGCTCACACTAAAGGTGCTTCAGAAATAGTATTGGCTGCCTGTGACAAGGTGATCAACTCGAGTGGTGAGGTTGTTCCTTTAGATGAAGATTCCATCAAACATCTCAATGTTATTATCAATCAATTTGCTGGCGAAGCTCTACGAACACTTTGCCTTGCCTATATGGAACTGGAAAATGGATTCTCTGTCAATGATCCTATTCCACTTTCTGGTTATACCTGTATAGCTATTGTGGGTATTAAAGATCCTGTTCGTCCTGGTGTTAAAGAGTCTGTTGCAGTTTGTCGTTCAGCTGGAATTACTGTACGAATGGTTACTGGTGACAATATCCATACTGCAAAAGCTATTGCCAGGGAATGCGGAATTCTTACCGATGATGGCATAGCCATCGAGGGTCCAGATTTCAGAGAGAAGTCTCAAGAGGAGTTGCTTCAAATTATTCCCAAAATTCAGGTGATGGCTCGATCTTCACCTCTAGATAAGCACACTCTGGTCAAGCATTTGCGAACCACCTTTGATGAAGTTGTTGCAGTTACTGGTGATGGGACAAACGATGCTCCTGCTCTTCACGAAGCAGATATTGGACTTGCAATGGGCATTGCCGGAACTGAGGTCGCCAAAGAGAGTGCTGATGTGATCATTCTTGATGATAATTTCTCTACAATAGTGACTGTGGGAAAATGGGGTCGTTCTGTTTACATAAATATTCAAAAATTTGTGCAATTCCAGCTGACCGTTAACATAGTGGCGTTGATCGTAAACTTCACTTCAGCTTGTTTGACAGGTAATGCTCCTCTTACTGCAGTCCAGCTCTTGTGGGTGAACATGATTATGGATACACTTGGAGCTTTGGCTCTCGCGACTGAGCCTCCAAATGATGGCTTGATGAAGCGCTTACCTGTTGGAAGGAGAGGAAGTTTTATCAGCAATGTCATGTGGAGAAATATCTTGGGCCAGTCCTTGTATCAGTTTTCAGTCATATGGTATTTGCAGGCTAAAGGGAAAGAAGCGTTTGAAATCAAGGGCCCTGATTCTGATCTCGTACTGAATACCCTCATCTTCAATTGCTTTGTGTTCTGTCAGATTTTTAACGAAGTAAGTTCCAGGGAGATGGACAAAATCAATGTCTTCAAAGGCATACTTGATAACTATGTGTTTGTAGTTGTGATTGGTTCCACCATCTTCTTCCAAATAATAATCATTGAATTCCTGGGAACATTTGCAAGCACAACTCCTCTGAATCTGTCGCAGTGGATGTTTAGCGTGGTGATTGGATTTCTAGGCATGCCAATTGCTGCTATATTGAAGACTATTCAAGTATAA 3045 43.35 MERFLEENFGGVKPKNSSEEVLQRWRELCGVVKNPKRRFRFTANLSKRGEAAAMRQNNQEKLRIAVLVSKAAFQFIQGVQPSDYTVPEDVKAAGFHICAEELGSIVEGHDTKKFKFHGGVEGIAGKLCTSTTNGLEGDADALNRRQELFGVNKFAESEQRSFMVFVWEALQDMTLMILGLCAFVSLVVGIITEGWPHGAHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRNGYRQKMSIYDLLPGDVVHLSIGDQVPADGLFVSGFSVLIDESSLTGESEPVMVSAENPYLLSGTKVQDGSCKMIVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAIITFAVLVQGLLTRKLREGSQWSWSGDEALEILEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTITTNRMTVVKSCICMNVKESSNNASDFCSDLPASVVKLMLQSIFNNTGGEVVINKEGKRELLGTPTETALLQFALSLGGDFQAERQAGKLIKVEPFNSLKKRMGVVLQFPEGGFRAHTKGASEIVLAACDKVINSSGEVVPLDEDSIKHLNVIINQFAGEALRTLCLAYMELENGFSVNDPIPLSGYTCIAIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNIHTAKAIARECGILTDDGIAIEGPDFREKSQEELLQIIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIVTVGKWGRSVYINIQKFVQFQLTVNIVALIVNFTSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPNDGLMKRLPVGRRGSFISNVMWRNILGQSLYQFSVIWYLQAKGKEAFEIKGPDSDLVLNTLIFNCFVFCQIFNEVSSREMDKINVFKGILDNYVFVVVIGSTIFFQIIIIEFLGTFASTTPLNLSQWMFSVVIGFLGMPIAAILKTIQV 1014
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 68809405 68813897 + Hsped.04g13210.1 Hepe04g1321 568459
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1321 1014 Pfam E1-E2 ATPase 236 432 - -
Hepe04g1321 1014 Gene3D - 168 1012 - -
Hepe04g1321 1014 Gene3D - 450 798 IPR023214 -
Hepe04g1321 1014 Pfam Cation transport ATPase (P-type) 513 591 - -
Hepe04g1321 1014 Gene3D - 463 657 IPR023299 GO:0000166(InterPro)
Hepe04g1321 1014 SUPERFAMILY HAD-like 452 858 IPR036412 -
Hepe04g1321 1014 SFLD p-type atpase 435 805 IPR044492 -
Hepe04g1321 1014 Pfam haloacid dehalogenase-like hydrolase 649 767 - -
Hepe04g1321 1014 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 459 662 IPR023299 GO:0000166(InterPro)
Hepe04g1321 1014 PRINTS P-type cation-transporting ATPase superfamily signature 650 661 - -
Hepe04g1321 1014 PRINTS P-type cation-transporting ATPase superfamily signature 672 682 - -
Hepe04g1321 1014 PRINTS P-type cation-transporting ATPase superfamily signature 284 298 - -
Hepe04g1321 1014 PRINTS P-type cation-transporting ATPase superfamily signature 453 467 - -
Hepe04g1321 1014 PRINTS P-type cation-transporting ATPase superfamily signature 777 789 - -
Hepe04g1321 1014 PRINTS P-type cation-transporting ATPase superfamily signature 753 772 - -
Hepe04g1321 1014 FunFam Calcium-transporting ATPase 646 798 - -
Hepe04g1321 1014 PANTHER CATION TRANSPORTING ATPASE 77 1013 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
Hepe04g1321 1014 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1012 IPR006408 GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro)
Hepe04g1321 1014 PRINTS H+-transporting ATPase (proton pump) signature 753 769 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g1321 1014 PRINTS H+-transporting ATPase (proton pump) signature 785 810 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g1321 1014 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g1321 1014 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 50 IPR024750 GO:0005516(InterPro)
Hepe04g1321 1014 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 1013 IPR023298 -
Hepe04g1321 1014 ProSitePatterns E1-E2 ATPases phosphorylation site. 455 461 IPR018303 -
Hepe04g1321 1014 FunFam Calcium-transporting ATPase 216 336 - -
Hepe04g1321 1014 FunFam Calcium-transporting ATPase 463 657 - -
Hepe04g1321 1014 NCBIfam HAD-IC family P-type ATPase 389 480 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g1321 1014 NCBIfam HAD-IC family P-type ATPase 720 835 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g1321 1014 NCBIfam HAD-IC family P-type ATPase 205 376 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe04g1321 1014 CDD P-type_ATPase_Ca_PMCA-like 142 886 - -
Hepe04g1321 1014 Gene3D - 140 336 - -
Hepe04g1321 1014 Gene3D - 17 77 - -
Hepe04g1321 1014 FunFam Calcium-transporting ATPase 770 1014 - -
Hepe04g1321 1014 Pfam Cation transporting ATPase, C-terminus 838 1011 IPR006068 -
Hepe04g1321 1014 Pfam Cation transporter/ATPase, N-terminus 117 185 IPR004014 -
Hepe04g1321 1014 SUPERFAMILY Calcium ATPase, transduction domain A 239 333 IPR008250 -
Hepe04g1321 1014 SFLD C1.7: P-type atpase like 435 805 - -
Hepe04g1321 1014 FunFam Calcium-transporting ATPase 17 77 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2152 Hepe-Chr2:58261726 Hepe04g1321 Hepe-Chr4:68809405 6.71e-08 dispersed
Hepe02g2444 Hepe-Chr2:70563807 Hepe04g1321 Hepe-Chr4:68809405 0.0 dispersed
Hepe04g1321 Hepe-Chr4:68809405 Hepe05g0808 Hepe-Chr5:20694183 0.0 dispersed
Hepe03g1370 Hepe-Chr3:70335632 Hepe04g1321 Hepe-Chr4:68809405 8.82e-296 transposed
Hepe01g1829 Hepe-Chr1:83224216 Hepe04g1321 Hepe-Chr4:68809405 0.0 wgd
Hepe04g1321 Hepe-Chr4:68809405 Hepe08g1343 Hepe-Chr8:15418260 1.78e-83 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1321 K01537 - csv:101212315 1862.81