Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1362 ATGCGTCTTCTTCTTCTTCTCCTCTGTTTTCTGCAACTCAACATTCACCATTCTCTTTCTGCTCGTGTTTCTGAGTACCGAGCTCTTCTCTCCCTCAAAACCGCCATTACCGGCGACCCCAAATCCTCACTCTCGTCGTGGAACGCCTCCACTAGTCACTGCACTTGGTCTGGGGTCACTTGCGATTCTCGCCGCCATGTCACTGCCCTAGACCTCTCTGGCCTCGGCCTTTCCGGTTCCCTTTCCCCTGATGTTGCCTTTTTAAGGTTTCTCGCTAATCTTTCTCTCGCTTCTAATGAGTTTTCCGGTCCAATCCCGCCGGAGATTTCTTCTATCGCTTCGCTTCGGTTTCTGAACCTGTCTAATAATGTGTTCGATGGGTCGTTTCCTTCGCGGATTTCGCAGCTTCAGAATCTGCAGGTTCTTGACTTGTATAACAACAATATGACTGGGGATTTTCCCTTTGTGGTAACTGAAATGTTGCGGCTCCGCCATTTGCATTTGGGTGGAAATTTTTTCGCCGGACGGATCCCGCCGGAGGTCGGTCGGATGGAGTCCTTGGAGTACTTGGCGGTTTCTGGTAACGAACTTAGCGGTGCGATACCGCCGGAGATCGGAAACTTGACGAACCTTCGTGAGCTCTACATTGGCTACTTCAACGCCTACGACGGCGGTATTCCTGCCGAGATTGGGAATTTGTCGGAGTTGGTGCGGTTGGACGCTGCGAACTGTGGACTGACTGGCCGGATTCCGCCGGAGCTCGGAAAACTGAAGAACCTCGATACTCTGTTTCTTCAAGTGAATGCTCTATCTGGGCCATTGACGCTGGAGATTGGAGAGTTGAATAGCTTGAAATCGTTGGATTTGTCGAACAATATGCTTGTGGGTGAGATTCCCGAGTCGTTCGCCGATTTGAAGAACTTGACGCTGTTGAATCTGTTTAGAAACAAACTTCACGGAGCGATTCCTTCCTTTATTGGCGACTTGCCGAAACTGGAGGTGTTGCAGTTATGGGAGAACAATTTCACGGAAGCGATTCCACAGAACCTGGGGAAGAACGGAATGCTTCAGATTTTGGATCTTTCTTCCAACAAGCTGACTGGAACTCTTCCTCCCGACATGTGCTACGGTAATCGCCTTCAAACTCTGATCGCATTGAGCAATTTCTTGTTTGGTCCAATCCCAGAGTCGCTAGGCAAATGCGTTTCGCTTAATCGTATTCGAATGGGGGAAAATTTCCTCAATGGATCCATCCCAAATGGGCTTCTGAGTCTGCCGAAGCTCTCTCAGGTTGAGTTACAGGACAATTTCCTCTCCGGCGAGTTCCCAATAACCGATTCAATCTCAGTGAATCTTGGCCAGATTAGTCTCTCGAACAACCGTCTCTCCGGTTCGATTCCGCCGACAATCGGGAACTTCTCCGGCGTCCAGAAACTACTCCTCGACGGAAACAAATTCTCCGGTAAAATCCCACCCGAGATTGGGCGGTTACAGCAACTTTCAAAGATCGATTTCAGTAACAATAAGTTATTAGGCCCAATCGCGCCGGAGATTAGCCAATGCAAGCTTCTAACCTTCGTCGATCTCAGCCGAAATGAGCTCTCCGGAGAAATTCCGAACGAGATTACCAGTATGAGGATATTGAATTACCTGAATCTCTCAAAAAACCATTTAATCGGCGGAATCCCATCTTCCATAGCCAGCATGCAGAGTTTAACCTCAGTGGATTTCTCATACAACAATCTCTCCGGATTAGTTCCAGGAAGTGGGCAATTCAGTTACTTCAATTACACATCGTTTTTGGGCAATCCTGATCTCTGCGGCCCATATTTAGGACCTTGCAAAGATGGGGTTGCCAATAGCAATTACCAGCAACATGTAAAAGGTCCCCTCTCAGCTTCCCTTAAGCTCCTCCTTGTAATTGGTCTGCTTCTTTGCTCAATTGCATTTGCAGTTGCTGCCATCATCAAAGCTCGATCCTTAAAGCGAGCGAGCGAATCCCGGGCTTGGAAACTAACATCCTTCCAACGCCTAGATTTCACAGTGGATGATGTTCTTGATTGCTTGAAAGAGGATAACATTATTGGCAAAGGAGGGGCTGGCATTGTGTATAAAGGGGCGATGGCAAGTGGTGACCAGGTCGCCGTGAAAAGGCTGCCGGTGATGAGCCGTGGATCGTCCCATGACCATGGATTCAACGCTGAGATACAAACTCTTGGGAGGATTCGACACAGACACATCGTTAGGCTATTGGGATTTTGTTCAAACCATGAGACTAATCTTTTGATTTATGAGTATATGCCTAATGGGAGCTTGGGGGAAGTTCTTCATGGCAAAAAAGGGGGTCATTTGCAGTGGGATACCAGGTATAAGATTGCCATTGAAGCTGCTAAAGGGCTTTGCTACCTCCACCATGATTGCTCGCCGCTCATCGTTCATCGAGATGTGAAATCAAACAACATACTTCTTGACACTAATTTTGAAGCTCATGTTGCTGATTTTGGCTTGGCCAAGTTCTTGCAGGATTCCGGCACTTCTGAGTGCATGTCTGCCATTGCTGGTTCTTATGGATATATTGCCCCAGAATACGCGTACACGCTAAAAGTCGACGAGAAGAGTGACGTGTATAGCTTCGGAGTTGTCCTCTTGGAGCTTGTTAGTGGAAGAAAACCCGTCGGAGAATTCGGGGACGGTGTCGACATAGTTCAATGGGTTAGAAAAATGACAGACTCAAACAAGGAAGAGGTAGTGAAAGTCCTCGATCCAAGGCTCTCCTCTGTTCCTCTTCATGAAGTGATGCACGTCTTCTACGTCGCAATGCTGTGCGTCGAAGAACAGGCGGTCGAGCGCCCGACAATGCGGGAAGTGATCCAAATCCTAACGGAGATTCCACAGCCACCATGTTCAAAACAAGGAGACTCAACCCTCCCCACCTCCTCACCACCACCACCACCAGTCGCCCCCACCGCCACCGCGGCATTGGACCCTCCAACAACAGAAACCAAGAACAAAACAGACCAGCAGCAGCAGCCAACGGATCTCCTTAGCATTTGA 3054 48.62 MRLLLLLLCFLQLNIHHSLSARVSEYRALLSLKTAITGDPKSSLSSWNASTSHCTWSGVTCDSRRHVTALDLSGLGLSGSLSPDVAFLRFLANLSLASNEFSGPIPPEISSIASLRFLNLSNNVFDGSFPSRISQLQNLQVLDLYNNNMTGDFPFVVTEMLRLRHLHLGGNFFAGRIPPEVGRMESLEYLAVSGNELSGAIPPEIGNLTNLRELYIGYFNAYDGGIPAEIGNLSELVRLDAANCGLTGRIPPELGKLKNLDTLFLQVNALSGPLTLEIGELNSLKSLDLSNNMLVGEIPESFADLKNLTLLNLFRNKLHGAIPSFIGDLPKLEVLQLWENNFTEAIPQNLGKNGMLQILDLSSNKLTGTLPPDMCYGNRLQTLIALSNFLFGPIPESLGKCVSLNRIRMGENFLNGSIPNGLLSLPKLSQVELQDNFLSGEFPITDSISVNLGQISLSNNRLSGSIPPTIGNFSGVQKLLLDGNKFSGKIPPEIGRLQQLSKIDFSNNKLLGPIAPEISQCKLLTFVDLSRNELSGEIPNEITSMRILNYLNLSKNHLIGGIPSSIASMQSLTSVDFSYNNLSGLVPGSGQFSYFNYTSFLGNPDLCGPYLGPCKDGVANSNYQQHVKGPLSASLKLLLVIGLLLCSIAFAVAAIIKARSLKRASESRAWKLTSFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMASGDQVAVKRLPVMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLIYEYMPNGSLGEVLHGKKGGHLQWDTRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDTNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVSGRKPVGEFGDGVDIVQWVRKMTDSNKEEVVKVLDPRLSSVPLHEVMHVFYVAMLCVEEQAVERPTMREVIQILTEIPQPPCSKQGDSTLPTSSPPPPPVAPTATAALDPPTTETKNKTDQQQQPTDLLSI 1017
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 69258205 69262196 - Hsped.04g13620.1 Hepe04g1362 568500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1362 1017 Gene3D Ribonuclease Inhibitor 221 377 IPR032675 -
Hepe04g1362 1017 MobiDBLite consensus disorder prediction 977 991 - -
Hepe04g1362 1017 SMART serkin_6 689 959 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1362 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g1362 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Hepe04g1362 1017 SUPERFAMILY RNI-like 70 391 - -
Hepe04g1362 1017 Gene3D Transferase(Phosphotransferase) domain 1 767 973 - -
Hepe04g1362 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 766 - -
Hepe04g1362 1017 SMART LRR_typ_2 281 304 IPR003591 -
Hepe04g1362 1017 SMART LRR_typ_2 497 521 IPR003591 -
Hepe04g1362 1017 SMART LRR_typ_2 569 592 IPR003591 -
Hepe04g1362 1017 SMART LRR_typ_2 112 136 IPR003591 -
Hepe04g1362 1017 SMART LRR_typ_2 329 353 IPR003591 -
Hepe04g1362 1017 SMART LRR_typ_2 184 208 IPR003591 -
Hepe04g1362 1017 SMART LRR_typ_2 354 377 IPR003591 -
Hepe04g1362 1017 Gene3D Ribonuclease Inhibitor 135 220 IPR032675 -
Hepe04g1362 1017 Pfam Protein kinase domain 691 958 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1362 1017 MobiDBLite consensus disorder prediction 994 1017 - -
Hepe04g1362 1017 Gene3D Ribonuclease Inhibitor 24 134 IPR032675 -
Hepe04g1362 1017 SUPERFAMILY Protein kinase-like (PK-like) 681 961 IPR011009 -
Hepe04g1362 1017 MobiDBLite consensus disorder prediction 964 1017 - -
Hepe04g1362 1017 Gene3D Phosphorylase Kinase; domain 1 654 766 - -
Hepe04g1362 1017 Pfam Leucine Rich Repeat 451 473 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 114 136 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 138 154 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 356 375 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 236 257 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 524 545 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 283 305 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 186 208 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 477 497 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 Pfam Leucine Rich Repeat 548 569 IPR001611 GO:0005515(InterPro)
Hepe04g1362 1017 SUPERFAMILY L domain-like 298 614 - -
Hepe04g1362 1017 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Hepe04g1362 1017 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1362 1017 Gene3D Ribonuclease Inhibitor 378 615 IPR032675 -
Hepe04g1362 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Hepe04g1362 1017 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 8 963 IPR050647 -
Hepe04g1362 1017 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 976 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0335 Hepe-Chr3:4586718 Hepe04g1362 Hepe-Chr4:69258205 2.95e-81 dispersed
Hepe04g1362 Hepe-Chr4:69258205 Hepe07g0583 Hepe-Chr7:6307627 2.80e-236 dispersed
Hepe04g1361 Hepe-Chr4:69236277 Hepe04g1362 Hepe-Chr4:69258205 2.61e-124 tandem
Hepe01g1605 Hepe-Chr1:81332934 Hepe04g1362 Hepe-Chr4:69258205 3.79e-148 transposed
Hepe02g2817 Hepe-Chr2:77276154 Hepe04g1362 Hepe-Chr4:69258205 2.52e-90 transposed
Hepe04g2125 Hepe-Chr4:76043627 Hepe04g1362 Hepe-Chr4:69258205 2.70e-155 transposed
Hepe07g0528 Hepe-Chr7:5597587 Hepe04g1362 Hepe-Chr4:69258205 5.84e-159 transposed
Hepe09g0218 Hepe-Chr9:1858711 Hepe04g1362 Hepe-Chr4:69258205 8.67e-80 transposed
Hepe10g1910 Hepe-Chr10:55903880 Hepe04g1362 Hepe-Chr4:69258205 8.09e-63 transposed
Hepe10g1449 Hepe-Chr10:51279031 Hepe04g1362 Hepe-Chr4:69258205 2.43e-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72752 PF07714 PK_Tyr_Ser-Thr 1.40E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1362 - - - 0.0