Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1377 ATGGAGCTGAGTCAACATGGTTTCTTAGAGGAGTTATTATCTTCAACGCCTTGGTCTTCATCATTCTCAAATGGCTTCAATGATTTCTTCCAAAATGCTTGGAATTTCACTTCTTTTGATGATGAAAATCCCCAAATCGCCGCTAACTCTAATAATTTCCCCCACTTTCCTGCTATCCAAACACCTTCTGATTTTTCTTTCCCCGACCAACATCTCTACACCAATTTTCTCGAAGGTTTTGCAATGCCTGACCTCGATTCCTCATCCTACACCAAGAACAACGAAACCCCACCATTTGTTTCTCAAGAAGAAAACAGCGCCTACCCTCCTCCTCCTCCGGAGGAAGAACTTGGTTTTATGGACAGCGAAGCGGCGGCGACGGCGACTCCAAGTGTGTGCAAAGTGGAAATGGAGCAAATGGGTGGCCGTGAAATTAATGGTTCTAAAATGGGTTTGGGAGAATTGGGGAAAAGAAGCAACAAAGCTAAGAAGATTGAAGGACAACCCTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCAATGCTTAGAGCAATAGTCCCTAAAATAAGCAAGATGGACAGAACGTCTATACTTGGAGACACAATTGATTATGTGAAAGAGCTGCTTGAAAGAATCAATAACTTGAAGGAAGAAGAGGAAACAGTTGGTTTAGATTCAAATCAAAATCATGTTAGCTTAAATGGGATCTCCAAGGAAGGGAAGTCCAATGAAGTTCTAGTGAGAAATTCCCCCAAGTTCGATGTTGAAAGGAGGGAGAGGGTGACTCGAATAGACATTTGCTGTGCGACGAGGCCAGGATTATTGCTGTCGACTGTCAACACATTAGAAGCATTGGGCCTTGAGATTCAACAGTGTGTTATTAGCTGCTTCAATGATTTTTCAATGCAAGCTTCCTGTTCAGAGGGAACTGCTCAGAAAGCAGTGGCAAGTTCTGATGATATAAAGGAAGCATTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAG 1035 42.8 MELSQHGFLEELLSSTPWSSSFSNGFNDFFQNAWNFTSFDDENPQIAANSNNFPHFPAIQTPSDFSFPDQHLYTNFLEGFAMPDLDSSSYTKNNETPPFVSQEENSAYPPPPPEEELGFMDSEAAATATPSVCKVEMEQMGGREINGSKMGLGELGKRSNKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEEETVGLDSNQNHVSLNGISKEGKSNEVLVRNSPKFDVERRERVTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGTAQKAVASSDDIKEALFRNAGYGGKCL 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 69436800 69438504 - Hsped.04g13770.1 Hepe04g1377 568515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1377 344 MobiDBLite consensus disorder prediction 87 103 - -
Hepe04g1377 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 170 236 IPR036638 GO:0046983(InterPro)
Hepe04g1377 344 Gene3D - 159 231 IPR036638 GO:0046983(InterPro)
Hepe04g1377 344 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 124 339 IPR051358 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe04g1377 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 167 216 IPR011598 GO:0046983(InterPro)
Hepe04g1377 344 MobiDBLite consensus disorder prediction 156 171 - -
Hepe04g1377 344 Coils Coil 206 233 - -
Hepe04g1377 344 SMART finulus 173 222 IPR011598 GO:0046983(InterPro)
Hepe04g1377 344 MobiDBLite consensus disorder prediction 87 111 - -
Hepe04g1377 344 MobiDBLite consensus disorder prediction 144 171 - -
Hepe04g1377 344 Pfam Helix-loop-helix DNA-binding domain 174 216 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0396 Hepe-Chr3:5680979 Hepe04g1377 Hepe-Chr4:69436800 5.88e-10 dispersed
Hepe04g1377 Hepe-Chr4:69436800 Hepe07g2082 Hepe-Chr7:65083710 2.90e-35 dispersed
Hepe02g0417 Hepe-Chr2:3976085 Hepe04g1377 Hepe-Chr4:69436800 2.04e-17 transposed
Hepe01g2191 Hepe-Chr1:86605085 Hepe04g1377 Hepe-Chr4:69436800 3.72e-80 wgd
Hepe10g0404 Hepe-Chr10:4507374 Hepe04g1377 Hepe-Chr4:69436800 3.23e-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55446 PF00010 HLH 1.90E-09 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1377 - - - 0.0