Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1377 | ATGGAGCTGAGTCAACATGGTTTCTTAGAGGAGTTATTATCTTCAACGCCTTGGTCTTCATCATTCTCAAATGGCTTCAATGATTTCTTCCAAAATGCTTGGAATTTCACTTCTTTTGATGATGAAAATCCCCAAATCGCCGCTAACTCTAATAATTTCCCCCACTTTCCTGCTATCCAAACACCTTCTGATTTTTCTTTCCCCGACCAACATCTCTACACCAATTTTCTCGAAGGTTTTGCAATGCCTGACCTCGATTCCTCATCCTACACCAAGAACAACGAAACCCCACCATTTGTTTCTCAAGAAGAAAACAGCGCCTACCCTCCTCCTCCTCCGGAGGAAGAACTTGGTTTTATGGACAGCGAAGCGGCGGCGACGGCGACTCCAAGTGTGTGCAAAGTGGAAATGGAGCAAATGGGTGGCCGTGAAATTAATGGTTCTAAAATGGGTTTGGGAGAATTGGGGAAAAGAAGCAACAAAGCTAAGAAGATTGAAGGACAACCCTCGAAGAATTTAATGGCGGAAAGAAGAAGAAGGAAGCGGTTGAATGATCGGCTTTCAATGCTTAGAGCAATAGTCCCTAAAATAAGCAAGATGGACAGAACGTCTATACTTGGAGACACAATTGATTATGTGAAAGAGCTGCTTGAAAGAATCAATAACTTGAAGGAAGAAGAGGAAACAGTTGGTTTAGATTCAAATCAAAATCATGTTAGCTTAAATGGGATCTCCAAGGAAGGGAAGTCCAATGAAGTTCTAGTGAGAAATTCCCCCAAGTTCGATGTTGAAAGGAGGGAGAGGGTGACTCGAATAGACATTTGCTGTGCGACGAGGCCAGGATTATTGCTGTCGACTGTCAACACATTAGAAGCATTGGGCCTTGAGATTCAACAGTGTGTTATTAGCTGCTTCAATGATTTTTCAATGCAAGCTTCCTGTTCAGAGGGAACTGCTCAGAAAGCAGTGGCAAGTTCTGATGATATAAAGGAAGCATTGTTCAGAAATGCAGGATATGGAGGGAAGTGCTTGTAG | 1035 | 42.8 | MELSQHGFLEELLSSTPWSSSFSNGFNDFFQNAWNFTSFDDENPQIAANSNNFPHFPAIQTPSDFSFPDQHLYTNFLEGFAMPDLDSSSYTKNNETPPFVSQEENSAYPPPPPEEELGFMDSEAAATATPSVCKVEMEQMGGREINGSKMGLGELGKRSNKAKKIEGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYVKELLERINNLKEEEETVGLDSNQNHVSLNGISKEGKSNEVLVRNSPKFDVERRERVTRIDICCATRPGLLLSTVNTLEALGLEIQQCVISCFNDFSMQASCSEGTAQKAVASSDDIKEALFRNAGYGGKCL | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 69436800 | 69438504 | - | Hsped.04g13770.1 | Hepe04g1377 | 568515 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1377 | 344 | MobiDBLite | consensus disorder prediction | 87 | 103 | - | - | |
Hepe04g1377 | 344 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 170 | 236 | IPR036638 | GO:0046983(InterPro) | |
Hepe04g1377 | 344 | Gene3D | - | 159 | 231 | IPR036638 | GO:0046983(InterPro) | |
Hepe04g1377 | 344 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 124 | 339 | IPR051358 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER) | |
Hepe04g1377 | 344 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 167 | 216 | IPR011598 | GO:0046983(InterPro) | |
Hepe04g1377 | 344 | MobiDBLite | consensus disorder prediction | 156 | 171 | - | - | |
Hepe04g1377 | 344 | Coils | Coil | 206 | 233 | - | - | |
Hepe04g1377 | 344 | SMART | finulus | 173 | 222 | IPR011598 | GO:0046983(InterPro) | |
Hepe04g1377 | 344 | MobiDBLite | consensus disorder prediction | 87 | 111 | - | - | |
Hepe04g1377 | 344 | MobiDBLite | consensus disorder prediction | 144 | 171 | - | - | |
Hepe04g1377 | 344 | Pfam | Helix-loop-helix DNA-binding domain | 174 | 216 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe03g0396 | Hepe-Chr3:5680979 | Hepe04g1377 | Hepe-Chr4:69436800 | 5.88e-10 | dispersed | |
Hepe04g1377 | Hepe-Chr4:69436800 | Hepe07g2082 | Hepe-Chr7:65083710 | 2.90e-35 | dispersed | |
Hepe02g0417 | Hepe-Chr2:3976085 | Hepe04g1377 | Hepe-Chr4:69436800 | 2.04e-17 | transposed | |
Hepe01g2191 | Hepe-Chr1:86605085 | Hepe04g1377 | Hepe-Chr4:69436800 | 3.72e-80 | wgd | |
Hepe10g0404 | Hepe-Chr10:4507374 | Hepe04g1377 | Hepe-Chr4:69436800 | 3.23e-84 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55446 | PF00010 | HLH | 1.90E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1377 | - | - | - | 0.0 |