Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g1378 | ATGGCCGATCAGGTTCAACATCCCACTATCTATCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGGTGCTTCGGGGTTCTGTGCTAATAATGATGGCTTTAGGAATCCTGCACTTTATCAGAGACGTGCATCAATCAGCAATTATTCAAATGCTGCTTTTCAATATCCCGCCGGGCAATCCTGTGTTGCTACAACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTCGTTGCTGCCCCTGCCGAGAAAGGAACCTTTCTGATTGACTTTCTTATGGGTGGTGTGTCTGCGGCTGTATCCAAGACAGCTGCTGCCCCGATCGAGCGTGTCAAACTCTTAATTCAAAATCAGGATGAGATGATTAAAGCTGGACGTCTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTTAAGCGCACAATGCAAGAAGAGGGTTTCGGTTCATTGTGGAGGGGAAACACTGCCAATGTCATCCGTTATTTCCCTACTCAAGCATTGAACTTTGCTTTCAAGGATTATTTCAAGAGACTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACTTGGCATCAGGTGGTGCAGCTGGTGCTTCATCCCTTTTTTTTGTTTACTCTCTTGACTATGCTCGTACCCGATTGGCAAACGATGCCAAAGCTGCCAAGAAAGGTGGAGGAGGAAGGCAATTCGATGGACTGGTTGATGTCTACAGAAAGACATTGCAGTCTGATGGTGTTGCTGGTCTTTATCGTGGATTTAACATTTCTTGTGTTGGTATTATCGTGTACCGTGGTTTGTACTTTGGAATGTACGATTCTCTGAAGCCCGTTTTATTGACGGGGAAGATGCAGGATAGTTTCTTTGCTAGCTTTGCCCTCGGTTGGCTCATCACCAATGGTGCTGGGCTTGCGTCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCTGGTGAAGCAGTCAAGTACAAGAGCTCAATGGATGCGTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCCAACATTCTTCGTGCTGTTGCCGGTGCTGGTGTGCTAGCCGGTTACGACAAGTTGCAGGTGATTGTCTTAGGAAAGAAATACGGATCTGGTGGTGCCTAA | 1176 | 46.68 | MADQVQHPTIYQKVAGQLSLQSRGASGFCANNDGFRNPALYQRRASISNYSNAAFQYPAGQSCVATTDLSRVASTASPIFVAAPAEKGTFLIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFKRTMQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLFFVYSLDYARTRLANDAKAAKKGGGGRQFDGLVDVYRKTLQSDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVLGKKYGSGGA | 391 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 69455331 | 69457967 | - | Hsped.04g13780.1 | Hepe04g1378 | 568516 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g1378 | 391 | PRINTS | Adenine nucleotide translocator signature | 193 | 206 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Adenine nucleotide translocator signature | 299 | 315 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Adenine nucleotide translocator signature | 90 | 102 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Adenine nucleotide translocator signature | 134 | 155 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Adenine nucleotide translocator signature | 167 | 179 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Hepe04g1378 | 391 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 294 | 380 | IPR018108 | - | |
| Hepe04g1378 | 391 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 88 | 181 | IPR018108 | - | |
| Hepe04g1378 | 391 | Pfam | Mitochondrial carrier protein | 88 | 185 | IPR018108 | - | |
| Hepe04g1378 | 391 | Pfam | Mitochondrial carrier protein | 193 | 288 | IPR018108 | - | |
| Hepe04g1378 | 391 | Pfam | Mitochondrial carrier protein | 294 | 382 | IPR018108 | - | |
| Hepe04g1378 | 391 | Gene3D | Mitochondrial carrier domain | 91 | 387 | IPR023395 | - | |
| Hepe04g1378 | 391 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 86 | 388 | IPR002113 | GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Mitochondrial carrier protein signature | 156 | 176 | IPR002067 | GO:0055085(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Mitochondrial carrier protein signature | 106 | 120 | IPR002067 | GO:0055085(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Mitochondrial carrier protein signature | 93 | 106 | IPR002067 | GO:0055085(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Mitochondrial carrier protein signature | 259 | 277 | IPR002067 | GO:0055085(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Mitochondrial carrier protein signature | 208 | 226 | IPR002067 | GO:0055085(InterPro) | |
| Hepe04g1378 | 391 | PRINTS | Mitochondrial carrier protein signature | 303 | 325 | IPR002067 | GO:0055085(InterPro) | |
| Hepe04g1378 | 391 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 193 | 286 | IPR018108 | - | |
| Hepe04g1378 | 391 | SUPERFAMILY | Mitochondrial carrier | 89 | 376 | IPR023395 | - | |
| Hepe04g1378 | 391 | FunFam | ADP,ATP carrier protein, mitochondrial | 91 | 387 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g0128 | Hepe-Chr2:1451157 | Hepe04g1378 | Hepe-Chr4:69455331 | 3.59e-194 | dispersed | |
| Hepe03g1739 | Hepe-Chr3:74277313 | Hepe04g1378 | Hepe-Chr4:69455331 | 1.21e-269 | dispersed | |
| Hepe04g1378 | Hepe-Chr4:69455331 | Hepe07g2442 | Hepe-Chr7:68767739 | 5.83e-132 | dispersed | |
| Hepe04g1378 | Hepe-Chr4:69455331 | Hepe05g0092 | Hepe-Chr5:989793 | 3.32e-28 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g1378 | K05863 | - | csv:101203733 | 706.827 |