Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1386 ATGTATGATTGGAGTCCGGAAGTAAATGCGAACCACCCAAATGGGCCCGAGCCCATGAAGAATGTGAGAGTAGGATCAACGATGAGCAAATCAGCGGAGCAAGAGCACCCTAAGAAGGCATTTGGATGGGCGGCCAGAGATACCTCCGGCGTTCTTTCTCCATTTCATTTCTCCAGAAGAGAAACAGGGGAAAAAGATGTGGCTTTCAAAGTTCTTTACTGTGGGATATGCCATTCTGATCTTCACATGGTTAAGAATGAATGGGGCAATACCATTTACCCTATTGTTCCTGGCCATGAAGTCGTAGGTGAGGTAACTGAAGTTGGAAGCAAGGTACAAAAATTCAAGGTCGGAGACAGAGTTGGCGTAGGATGTATGGTCGGATCCTGCCGCTCTTGTGATAACTGTTCCGTCGACCTCGAGAACTATTGCCCCAAAATGATTCTCACCTACTCTTCCAAAGTCTCCGATGGCACCGTAACCTACGGCGGCTACTCCGACTGTATGGTTGCCGACGAGCATTTCATCGTTCGCATTCCCGATGGCATCCCTCTGGACGCTGCAGCTCCCCTGCTGTGCGCTGGTATCACGGTTTACAGCCCCTTGAGATATTATGGACTTGACAAGCCTGGTATGCAAATCGGCGTGGTTGGCCTCGGCGGGCTTGGCCATGTTGCTGTCAAATTCGCCAAGGCCTTTGGCGCTAAGGTGACTGTGATTAGTACCTCCCCTAACAAGAAGCAGGAGGCTATTGAACGTCTTGGGGCTGATTCATTCTTGGTTAGCCGTGATCAAGAGCAAATGCAGGCTGCTACGGGGACTTTGGATGGCATCATAGACACAGTCTCTGCTGTACATCCCCTTCTTCCTCTGCTGTCACTTATCAAAAGTCATGGAAAGCTTGTAATGGTTGGTGCACCAGAGAAGCCTCTCGAGCTCCCAGCCTTCGCTCTTATTGGTGGTAGGAAGACAATGGCCGGTAGTTGCATTGGAGGGATGAAAGAAACGCAAGAGATGATTGATTTTGCAGCCAAACACAATATAACTGCGGACATCGAAGTTATTCCAGTCACTGACGTCAACACCGCCATGGAACGAATGCTGAAACAAGACGTCAAATATCGTTTCGTGATCGACATTGCCAAGACAATGAAAGCTTAG 1161 49.1 MYDWSPEVNANHPNGPEPMKNVRVGSTMSKSAEQEHPKKAFGWAARDTSGVLSPFHFSRRETGEKDVAFKVLYCGICHSDLHMVKNEWGNTIYPIVPGHEVVGEVTEVGSKVQKFKVGDRVGVGCMVGSCRSCDNCSVDLENYCPKMILTYSSKVSDGTVTYGGYSDCMVADEHFIVRIPDGIPLDAAAPLLCAGITVYSPLRYYGLDKPGMQIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPNKKQEAIERLGADSFLVSRDQEQMQAATGTLDGIIDTVSAVHPLLPLLSLIKSHGKLVMVGAPEKPLELPAFALIGGRKTMAGSCIGGMKETQEMIDFAAKHNITADIEVIPVTDVNTAMERMLKQDVKYRFVIDIAKTMKA 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 69519309 69522118 - Hsped.04g13860.1 Hepe04g1386 568524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1386 386 FunFam Uncharacterized protein 43 193 - -
Hepe04g1386 386 MobiDBLite consensus disorder prediction 1 36 - -
Hepe04g1386 386 CDD CAD1 41 379 IPR047109 GO:0016616(InterPro)
Hepe04g1386 386 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 98 112 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Hepe04g1386 386 Pfam Alcohol dehydrogenase GroES-like domain 64 181 IPR013154 -
Hepe04g1386 386 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 184 348 IPR036291 -
Hepe04g1386 386 Pfam Zinc-binding dehydrogenase 221 344 IPR013149 -
Hepe04g1386 386 PANTHER ALDEHYDE REDUCTASE 32 382 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Hepe04g1386 386 FunFam Cinnamyl alcohol dehydrogenase 194 350 - -
Hepe04g1386 386 Gene3D - 194 350 - -
Hepe04g1386 386 SMART PKS_ER_names_mod 50 378 IPR020843 GO:0016491(InterPro)
Hepe04g1386 386 Gene3D - 43 380 - -
Hepe04g1386 386 SUPERFAMILY GroES-like 47 211 IPR011032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1598 Hepe-Chr1:81270372 Hepe04g1386 Hepe-Chr4:69519309 3.44e-150 dispersed
Hepe04g1386 Hepe-Chr4:69519309 Hepe10g0740 Hepe-Chr10:11350230 2.22e-184 dispersed
Hepe04g1386 Hepe-Chr4:69519309 HepeContig67g0004 Hepe-ChrContig67:510515 2.34e-186 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1386 K23232 - csv:101222715 645.58