Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1389 ATGGGAACTCAAAGTCAGACAGGATTAATAGCACAACAGAAGATGCTTCCTCCACAACCTGGAAGATTTGAAGATCGTGATGACCTCATTAAATATGTTCGTGATTTTGGTGGCGATCAGGGATATGTGGTAACAATTAAGAAGTCTAGGAAGGATAGAAGGGTCATCCTTGGTTGTGATAGAGGAGGTGTGTACCGTAACAGGCGTAAGATTGATGAGAATCGGCGAAAAAGGAAAGCTAACTCACGCTTGATAAATTGCCCATTTGAAGCAATTGGCAAGAAGGAAGATGATGCCTGGATGCTTACCATTAAAAATGGGGGCCATAACCATGAGCCCTTAATAGACATGTCAGAGCATCCTCACAGTCGCCGTTTTACTGAGGATGAAGTAAGGCAAATAAAACTGATGACTGAAGCTGGGATAAAACCACGTCAAGTACTTAAAGCTCTCAAACAACATAATCCAGATCTGCAGTCAACACCAAGGCATTTGTACAACCTCAAGGCCAAAATTCGCCAAGGAAATCTATCAGAAAAGAATTTCAAGTCATGGAGACCTAATATTTCAGTTCCTGCAAATAGTAGTCATACTGTCATTGGCGACTCAGTCAAGCAAAAGCATCAGCTGAAGGTTCCTAATTTAATTGGAGGGGAGTTTTTGGATTCGCGCAACTGTCCAGTGGTTGATGTTATTAATCCAGCAACACAAGAAGTTGTTTCTCAAGTTCCTTTAACAACCTATGAAGAGTTTAAGGCCGCAGTTAATGCAGCCAAACAAGCTTTTCCCTCGTGGAAAAACACACCAATTTCTACCCGTCAACGTATTATGTTCAAGTTCCAGGAGCTCATCCTCAGGGACATGGATAAGCTTGTGATGAATATTGTCACAGAACAGGGCAAAACATTAAAGCATGCTCAAGATGATATCCTCTGTGGTTTAGAGGTGGTTAAACATGCTTGTGGATTGGCCACTATGCAAATGGGGGAGTTCATCCCTAATGCATCTGATGGGATTGATTCCTACTGCATCCGAGAACCAGTAGGTGTTTGTGCTGGGATATGCTCTTTTAACCATCCAGCAACAATTTCCTTATGGATGTTTCCGATTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAAAGCACCCGGGGGCTTCAATGTTGCTAGCTGCATTAGCAGTGGAGGCTGGTTTGCCTGATGGTGTTCTAAATATTGTTCATGGAACCCATGATATCGTCAATTATATATGTGATGATGAGGACATAAAAGCCATATCTTTTGCCAGTTCAAGTTCAGCTGGAAAAAACATATATGCTAGGGCCGCTGCTACAGGAAAGCAAGTTCAGTCCAATTTAGGAGGCAAGAGTCATGCAATTATTATGCCTGATGCTAACAAGGAAGTTACTTTAAATGCTCTGGTTGATGCTGGATTTGGTACTGCTGGACAGACAAGTATGGCTATCAACATCGTTGTCTCCGTTGGGAGTTCAATTCTGTGGGAAGAAAAACTTGTGGAATGTGCCAAAGCACTTAAAATGAATGTGGGGACAGATCCCAATGCTGATCTTGGTCCTGTAATTACCAAAGAGGTGAAAGATCGTTTTTGTAGATTAGTTCAAAGTGGCATTGAAGATGGTGCTAGACTTCTGCTTGACGGTAGAGATATTGTGGTCCCAGGATACGAAAATGGAAATTTTGTTGGTCCAACCATATTATCTGATGTAACAACGAACATGGAGTGCTACAAGGAAGAATTTTTTGGACCAGTTCTCCTTTATATGCAGGCTGACAACCTAGAGGAGGCTATGTCCATTGTAAACAGAAACAAGAACCGAAATGGAGCTTCCATATTCACAACTTCTGGCATTTATGCGAGGAAGTTTCAGAGTGAAGTGGAAGTGGGAATGGTTGGTATCAATGTTGCTGTTCCAGTTCCGCTGCCATCTTCCTTTAATGATAAGGCAGGCCTGGAATTTTACACCCAATTGAAAAGAGTGGCTCAACAGTGGAAGAACTCACCAAGTATTGGAGTCTCAATGGCGGTGCCTTCACCATGTGAGAGACATTTGAGATCCCGTGCTGTACCTTCAATGTTGGTTTCAGCATCTGAGAAAGATTCACCTGGTGGGCGGCATAGAAGTTTACCCCCGTTGCCTTCCACATATGAGAGGGATTCACCTAGCGATGCTGTACTGCTGCGGAACCCTCAAATATCTCAGATAGATTTAACCAATGAAAGAGCCACCTCGTCTCCGCCAACTCCTGATAGGGATTTGCACGGTCAGGGACTCTCCCTGATTTCTACCTTGTCATCAGAAGGGGATGTATCCAACCAAGATTTGTCTCCTGCTATGCCTTTGGCAGGTGATAGAGATTTACCTGGCCAAGCTATGTCAGTGGCAACATCCCGATCTTCTGAGAGACTGTACATACCTCAGAAATCTCATTGGAATGAAACCCAGAGGGCTGATTCAATTCCATCCTGTTCTGAGAGGATCCATGTGCCCTCATCGCATACAAGCAGCATCAAAACGCAGGCATCTCGAACAACTCATCCTGCTTTGGTCTTAGCTGCAGAGGGGTTATATATGCCTACATCTCATGACAGTATTTGTCTGATAACTCATGGAAATGATAGTATAGTTCCATCTCAAAGAATCGACAGCATGTGTCAATCATCAGAACGAGTATACATGCTAGCAACTTCCCATCTGAACGACAGTATGAGTCAAACATTGCAGAGAACTGACACCTCCCTGTTTTCTTCTTCAGGGAGGCATTATATGCCTCCCACTTCTCATGGAAATGACCACATCAGCTTGGCCTCTCATACCGACATTGCTTTGCAATCAACTTCGGATAGAATGTACTTGTCTAACTTGTCTGAGAGGGACGATAATATGGCTTCTGCTACTTCTCAACAAGCTGAATCTTTAACATCCACTTCAGAGAGAATGTATATACCTCCATTAGTAGTTCATAGAAATGCAGGTATTGCACCAAAATCGGAATGGTTATGCATTCCTACGCCTGCTGTATCTCAGAGAATGTATTCACAAGGTCCAATAGTTTCAGCAGATGAATTTCAAAGCCAAGGAGCATCACAAAGAATGTAA 3129 42.95 MGTQSQTGLIAQQKMLPPQPGRFEDRDDLIKYVRDFGGDQGYVVTIKKSRKDRRVILGCDRGGVYRNRRKIDENRRKRKANSRLINCPFEAIGKKEDDAWMLTIKNGGHNHEPLIDMSEHPHSRRFTEDEVRQIKLMTEAGIKPRQVLKALKQHNPDLQSTPRHLYNLKAKIRQGNLSEKNFKSWRPNISVPANSSHTVIGDSVKQKHQLKVPNLIGGEFLDSRNCPVVDVINPATQEVVSQVPLTTYEEFKAAVNAAKQAFPSWKNTPISTRQRIMFKFQELILRDMDKLVMNIVTEQGKTLKHAQDDILCGLEVVKHACGLATMQMGEFIPNASDGIDSYCIREPVGVCAGICSFNHPATISLWMFPIAVTCGNTFVLKPCEKHPGASMLLAALAVEAGLPDGVLNIVHGTHDIVNYICDDEDIKAISFASSSSAGKNIYARAAATGKQVQSNLGGKSHAIIMPDANKEVTLNALVDAGFGTAGQTSMAINIVVSVGSSILWEEKLVECAKALKMNVGTDPNADLGPVITKEVKDRFCRLVQSGIEDGARLLLDGRDIVVPGYENGNFVGPTILSDVTTNMECYKEEFFGPVLLYMQADNLEEAMSIVNRNKNRNGASIFTTSGIYARKFQSEVEVGMVGINVAVPVPLPSSFNDKAGLEFYTQLKRVAQQWKNSPSIGVSMAVPSPCERHLRSRAVPSMLVSASEKDSPGGRHRSLPPLPSTYERDSPSDAVLLRNPQISQIDLTNERATSSPPTPDRDLHGQGLSLISTLSSEGDVSNQDLSPAMPLAGDRDLPGQAMSVATSRSSERLYIPQKSHWNETQRADSIPSCSERIHVPSSHTSSIKTQASRTTHPALVLAAEGLYMPTSHDSICLITHGNDSIVPSQRIDSMCQSSERVYMLATSHLNDSMSQTLQRTDTSLFSSSGRHYMPPTSHGNDHISLASHTDIALQSTSDRMYLSNLSERDDNMASATSQQAESLTSTSERMYIPPLVVHRNAGIAPKSEWLCIPTPAVSQRMYSQGPIVSADEFQSQGASQRM 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 69545447 69558732 + Hsped.04g13890.1 Hepe04g1389 568527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1389 1042 CDD ALDH_F6_MMSDH 212 674 IPR010061 GO:0004491(InterPro)
Hepe04g1389 1042 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 457 651 IPR016163 GO:0016620(InterPro)
Hepe04g1389 1042 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 15 687 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Hepe04g1389 1042 MobiDBLite consensus disorder prediction 736 760 - -
Hepe04g1389 1042 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 457 656 - -
Hepe04g1389 1042 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 214 674 IPR010061 GO:0004491(InterPro)
Hepe04g1389 1042 SUPERFAMILY ALDH-like 205 676 IPR016161 GO:0016491(InterPro)
Hepe04g1389 1042 MobiDBLite consensus disorder prediction 703 766 - -
Hepe04g1389 1042 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 216 463 - -
Hepe04g1389 1042 Pfam Aldehyde dehydrogenase family 225 648 IPR015590 GO:0016491(InterPro)
Hepe04g1389 1042 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 231 456 IPR016162 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1389 Hepe-Chr4:69545447 Hepe09g0747 Hepe-Chr9:7167395 1.54e-47 dispersed
Hepe10g0002 Hepe-Chr10:70450 Hepe04g1389 Hepe-Chr4:69545447 3.73e-40 dispersed
Hepe02g0702 Hepe-Chr2:7694932 Hepe04g1389 Hepe-Chr4:69545447 2.96e-232 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1389 K00140 - csv:101207178 1787.7