Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1407 | ATGGCGGATAGTTTTTACTGTACAGAGAGCGCCAATACTTGTTTTGATGAATTTGATTGTAATGCCACAATTTCTCCGACCCACCGAAGAACCCGTGACCCGAATGTTGACTATTTCGAATCCGAGACTGAAGAGAGGATTAGAGAAATGGTTGGAAAAGAGATTGAGCATTTGCCCAGATATGATTATCTTAAGAGAATCCACAGTGGGGATTTCGATTTGAACTTTAGGAAACAGGCTGTTGATTGGATTTCCAAGGTTCATGCCCATTACAGCTTTGGACCATTGAGTCTTTGTCTATCTATGAACTACTTGGACCGTTTCCTCTCAGTGTATCACATGCCTATGGATAAAAGCTGGACTGTGCAGCTGCTGTCAGTAGCTTGTGTGTCTCTAGCAGCAAAGATGGAGGAGACAGAAGTTCCTCTTCCCATAGATTTACAGGTTGAGGAACCCAAGTTTGTGTTTGAAGCAAAAACCATACAAAGAATGGAGCTTCTTGTTCTAAGCAGGTTGAAATGGAAGATGCAAGCCATAACTCCATTTTCTTTCATTGATTATTTCCTCAGTAAGATCACTGTTGGGCAGCACATACCAAGTCAATCCTTCTTTAAATCATCACAGCTCATTCTGAGCACAATTAAAGGCATTGACTTCTTGGAGTTTAGGCCCTCTGAAATTGCTTTGGCTGTAGCAATTTCCATTTCAGGAGAATTGCAAGCACCAGACATGGATAAAGCAATCCTTTCTTTTCCATATATGGAGAAAGAGAGAGTGATGAAGTGTATTGAACTGATAAGAGATTTGTCATTGATTAATAATGTGTATGGAGGAAATGCATTGGTTCCTCAGAGTCCTGTTGGAGTATTGGATGCAGCTTGTTTGAGTTACAAAACAGAGGAATTTACTGCAGGAAGGTCATGTGGTAATTCTTCTTCTTCTTCTTCTTCAAATGACAGTCCAGACAGCAAGAGGAGGAGACAAGACAGACCATCATCAAAACATGATTCAACTCCATCCAGTCCTGTCAAATGA | 1035 | 40.77 | MADSFYCTESANTCFDEFDCNATISPTHRRTRDPNVDYFESETEERIREMVGKEIEHLPRYDYLKRIHSGDFDLNFRKQAVDWISKVHAHYSFGPLSLCLSMNYLDRFLSVYHMPMDKSWTVQLLSVACVSLAAKMEETEVPLPIDLQVEEPKFVFEAKTIQRMELLVLSRLKWKMQAITPFSFIDYFLSKITVGQHIPSQSFFKSSQLILSTIKGIDFLEFRPSEIALAVAISISGELQAPDMDKAILSFPYMEKERVMKCIELIRDLSLINNVYGGNALVPQSPVGVLDAACLSYKTEEFTAGRSCGNSSSSSSSNDSPDSKRRRQDRPSSKHDSTPSSPVK | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 69713449 | 69715245 | + | Hsped.04g14070.1 | Hepe04g1407 | 568545 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1407 | 344 | FunFam | D6-type cyclin | 173 | 264 | - | - | |
Hepe04g1407 | 344 | FunFam | D2/4-type cyclin | 60 | 172 | - | - | |
Hepe04g1407 | 344 | Pfam | Cyclin, N-terminal domain | 48 | 176 | IPR006671 | - | |
Hepe04g1407 | 344 | Gene3D | - | 60 | 177 | - | - | |
Hepe04g1407 | 344 | MobiDBLite | consensus disorder prediction | 304 | 344 | - | - | |
Hepe04g1407 | 344 | MobiDBLite | consensus disorder prediction | 320 | 334 | - | - | |
Hepe04g1407 | 344 | CDD | CYCLIN_AtCycD-like_rpt1 | 77 | 174 | - | - | |
Hepe04g1407 | 344 | SMART | Cyclin_C_2 | 179 | 317 | IPR004367 | - | |
Hepe04g1407 | 344 | ProSitePatterns | Cyclins signature. | 77 | 108 | IPR048258 | - | |
Hepe04g1407 | 344 | SUPERFAMILY | Cyclin-like | 35 | 176 | IPR036915 | - | |
Hepe04g1407 | 344 | PANTHER | CYCLINS | 41 | 240 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Hepe04g1407 | 344 | SMART | cyclin_7 | 82 | 170 | IPR013763 | - | |
Hepe04g1407 | 344 | CDD | CYCLIN_AtCycD-like_rpt2 | 179 | 266 | - | - | |
Hepe04g1407 | 344 | Gene3D | - | 49 | 264 | - | - | |
Hepe04g1407 | 344 | Pfam | Cyclin, C-terminal domain | 179 | 270 | IPR004367 | - | |
Hepe04g1407 | 344 | MobiDBLite | consensus disorder prediction | 304 | 319 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1799 | Hepe-Chr1:83023714 | Hepe04g1407 | Hepe-Chr4:69713449 | 5.56e-47 | dispersed | |
Hepe02g0604 | Hepe-Chr2:6278705 | Hepe04g1407 | Hepe-Chr4:69713449 | 8.03e-44 | dispersed | |
Hepe04g1407 | Hepe-Chr4:69713449 | Hepe08g1303 | Hepe-Chr8:14698500 | 1.07e-53 | dispersed | |
Hepe07g0403 | Hepe-Chr7:4097261 | Hepe04g1407 | Hepe-Chr4:69713449 | 8.80e-60 | transposed | |
Hepe08g0502 | Hepe-Chr8:4412557 | Hepe04g1407 | Hepe-Chr4:69713449 | 2.78e-36 | transposed | |
Hepe10g0446 | Hepe-Chr10:5063334 | Hepe04g1407 | Hepe-Chr4:69713449 | 6.15e-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1407 | K18810 | - | csv:101209378 | 525.783 |