Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1432 | ATGGAATTTTCCGGCGATCCACGGGTTCCGTTGCACAATCTCTCCACGATCCGCTCCAGAATGGACGCCGTCCAAATCTTCCTGTCCGATAACATCGACAGAGAAATTCGTATCAGCAATCAACAGATGGATGCGGTTTCGTCTGAAATCGCCACCGCGATCCAACAGATTATCGTCAACGGCGCCGCTCTTCTCGCCTGCGCCCAAGCGAAAACCCCCAATATGCCGGATTTGACCGGTTCAACCACTCCGAGTTCTGTAACGGGGAAATCAATTGTGGAGATGAAGGTCGAGGCTGTGGATGAGATTGCGAGACTCGAATCTGAGGAATTTGATGCGGATTGTGAAATAGTGGAGCTGGATGCGATGGAATTGCTAGCGGAGCATATCCATTTCTGCGAAATCTGCGGGAAAGGGTTCAAGCGCGATGCGAATTTGAGGATGCATATGCGGGCTCACGGGAACCAATTCAAAACACCTGAGGCGTTGGCGAAGCCGCCGTTGGATGTTGTTGCTGCTGCGACTGCGGACCACAGGGCGAAGCGGACGCGGTTTTCGTGCCCTTACGACGGTTGCATCCGGAATAAAACGCACGGTAAATTCCGGCCACTGAAATCTTTGATTTGCGTCAAGAATCACTTCAAGCGGAGCCACTGCCCCAAGATGTTTTCCTGCAATCGTTGCAACAAGAAGAGCTTCTCTGTAATGGCGGACTTGAAGAGCCACTTGAAGCACTGCGGTGAGTCGAAGTGGCGGTGTTCGTGTGGTACGACATTTTCCCGTAAGGATAAGCTATTTGGTCATATGGCGTTGTTCGAAGGCCACATGCCGGCGGTGGCGGATGACGACGATGGAAAGGGAAAAGCATCTGGCGTCGGCGCCGCCGCGACCCCTGAGAGGGACTGTAATCAGATTTCGAAGGATGTTAATTTCCCAAACGCATCGGTTGGTTCGGATGATGGATCTTTTGAATTGTTTCTTGATGGGTTTGGTTCGATTGAGAATCACTGTTTGCAAGAGGTGTTGGGATTCTCGGATAATTTCGATTCGGATTCCGAATGGAAATTTTGTGGTTTTTGA | 1080 | 50.93 | MEFSGDPRVPLHNLSTIRSRMDAVQIFLSDNIDREIRISNQQMDAVSSEIATAIQQIIVNGAALLACAQAKTPNMPDLTGSTTPSSVTGKSIVEMKVEAVDEIARLESEEFDADCEIVELDAMELLAEHIHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPPLDVVAAATADHRAKRTRFSCPYDGCIRNKTHGKFRPLKSLICVKNHFKRSHCPKMFSCNRCNKKSFSVMADLKSHLKHCGESKWRCSCGTTFSRKDKLFGHMALFEGHMPAVADDDDGKGKASGVGAAATPERDCNQISKDVNFPNASVGSDDGSFELFLDGFGSIENHCLQEVLGFSDNFDSDSEWKFCGF | 359 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 69976306 | 69977385 | - | Hsped.04g14320.1 | Hepe04g1432 | 568570 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1432 | 359 | Gene3D | Classic Zinc Finger | 131 | 154 | - | - | |
Hepe04g1432 | 359 | Pfam | Zinc finger, C2H2 type | 131 | 153 | IPR013087 | - | |
Hepe04g1432 | 359 | SUPERFAMILY | beta-beta-alpha zinc fingers | 128 | 154 | IPR036236 | - | |
Hepe04g1432 | 359 | SMART | c2h2final6 | 185 | 218 | IPR013087 | - | |
Hepe04g1432 | 359 | SMART | c2h2final6 | 251 | 275 | IPR013087 | - | |
Hepe04g1432 | 359 | SMART | c2h2final6 | 223 | 245 | IPR013087 | - | |
Hepe04g1432 | 359 | SMART | c2h2final6 | 131 | 153 | IPR013087 | - | |
Hepe04g1432 | 359 | Gene3D | Classic Zinc Finger | 210 | 280 | - | - | |
Hepe04g1432 | 359 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 131 | 158 | IPR013087 | - | |
Hepe04g1432 | 359 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 133 | 153 | IPR013087 | - | |
Hepe04g1432 | 359 | PANTHER | PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 | 107 | 301 | IPR044300 | GO:0010044(InterPro)|GO:0010447(InterPro) | |
Hepe04g1432 | 359 | FunFam | Zinc finger 45-like | 128 | 154 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1432 | Hepe-Chr4:69976306 | Hepe10g0914 | Hepe-Chr10:30748048 | 1.25e-67 | dispersed | |
Hepe04g1432 | Hepe-Chr4:69976306 | Hepe06g0068 | Hepe-Chr6:2059868 | 1.73e-75 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
55453 | PF00096 | zf-C2H2 | 0.00015 | CL0361 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1432 | - | - | - | 0.0 |