Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1483 ATGACCGGCAGAGGTTCATCGGGAAGGACTCCGACTTGGAAGGAAAGGGAGAACAATAAGAGGAGGGAGAGGCGGCGGAGGGCCATTGCTGCTAAGATCTACACTGGTCTCAGAGCTCAGGGGAGCTATAAGCTTCCTAAGCACTGTGATAACAACGAGGTCTTGAAGGCGCTCTGTAATGAAGCTGGTTGGGTGGTTGAAGAAGATGGCACTACCTATCGCAAGGGATGCAGGCCACCTCCGATTGATATTGGCACTTCTGCAAACATGAGTGCTTGTTCTTCTCTTCAACCAAGCCCACAATCTTCATGCTTCCCAAGTCCTGTACCATCCTACCATGCCAGTCCTTCTTCATCCTCTTTTCCAAGCCCAACTCGATTTGATGGGAACCCATCTTCTTATCTTCTGCCATTCCTTCAAAATATAACCTCTATACCTGCTAATCTCCCTCCTCTCAGAATATCAAACAGTGCACCTGTTACACCACCTCTTTCTTCCCCGACGTCAAGGGGTTCGAAGCGAAAGCCAGACTGGGAGTCCATTCCCAATAGCTACATGACATCTTTCCGCCATCCCCTCTTTGCTGTCTCTGCTCCTTCAAGTCCTACTCGATGCCACCATCTTACCCCGGCAACAATTCCAGAATGTGATGAGTCTGATGCTTCAACTGTGGACTCAGGCCGCTGGGTCAGTTTCCAGACTGTGGCAGTGGCACCTTCTGTGGCTCCTCCTTCCCCTACATTTAATCTGATGAAACCTGTTAGTCAGCAAAACTCTCTCCAAGATGCAGTTGACAGACATGGAGCAATGGGCTGGGGTGCTACCTCTGATAGGGGACGAGGCGCTGAGTTTGAATTTGAGAAATTTGAGAGTGGCAAAGTGAAGCCATGGGAGGGTGAGAGAATTCATGAAGTTGGGGTGGATGATTTGGAGCTTACACTTGGGAGTGGGAAGGCCCGTGGTTAA 966 50.0 MTGRGSSGRTPTWKERENNKRRERRRRAIAAKIYTGLRAQGSYKLPKHCDNNEVLKALCNEAGWVVEEDGTTYRKGCRPPPIDIGTSANMSACSSLQPSPQSSCFPSPVPSYHASPSSSSFPSPTRFDGNPSSYLLPFLQNITSIPANLPPLRISNSAPVTPPLSSPTSRGSKRKPDWESIPNSYMTSFRHPLFAVSAPSSPTRCHHLTPATIPECDESDASTVDSGRWVSFQTVAVAPSVAPPSPTFNLMKPVSQQNSLQDAVDRHGAMGWGATSDRGRGAEFEFEKFESGKVKPWEGERIHEVGVDDLELTLGSGKARG 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 70471002 70473876 + Hsped.04g14830.1 Hepe04g1483 568621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1483 321 MobiDBLite consensus disorder prediction 1 25 - -
Hepe04g1483 321 MobiDBLite consensus disorder prediction 10 24 - -
Hepe04g1483 321 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 6 320 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Hepe04g1483 321 MobiDBLite consensus disorder prediction 156 171 - -
Hepe04g1483 321 MobiDBLite consensus disorder prediction 156 179 - -
Hepe04g1483 321 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 129 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe07g0964 Hepe-Chr7:12953406 Hepe04g1483 Hepe-Chr4:70471002 3.98e-61 transposed
Hepe07g1834 Hepe-Chr7:61122013 Hepe04g1483 Hepe-Chr4:70471002 2.71e-68 transposed
Hepe10g0663 Hepe-Chr10:8780424 Hepe04g1483 Hepe-Chr4:70471002 3.64e-109 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55457 PF05687 BES1_N 9.40E-63 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1483 K14503 - csv:101216171 571.237