Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1485 ATGCCACCATTTTCTAAGATTAGACAGTGCTTCGTACTCACAATGCTAAAGTGCTTATTGGTCATAGCTTCATTGATCCTCTCATCTGCCTTTGCACAGGACAACGTTCCCCTTAAAGATCAATGGCTCACTTTGAGAGGGCAAGAGCCATTAGTAGTAGCAAGAGGAGGGTTATCTGGAGTGTTTCCAGAATCAAGCCCATTTGCAAATCAACTGGCAATGGTTTCAGGTTTAAAAGAGACAGTTTTGTACTGCAACCTTCAACTAACCAAAGATGGGATTGGGATTTGCTTAACTGATCTTAGGCTTCAAAACTCAACCAACATTGAAGACATCTTCCCTAGAGCAAATAAGAATTACAACGTTAATGGAAAGATTGTCAAAGGATGGTTTTCTGTTGATTACATGTCTGAGGATCTCTTTAACAAAGTCTACATGATCCAAAGTATCTTGTCCCGACCTAGTGTGTATGATGGTACTTTGCCACTTGCTGCTGTTGAAGATGTCGTTGGAATTAGACCACACCAATTTTGGTTGAACGCCGAGTACGAAGCATTCTACCACGAACACAATCTGAGTGTATCAACATACCTTCAAAAGGCATTGAGATTGATGCGCATAAACTTTGTGTCATCTTCTGAGATTGGTATATTGAAAGGGCTACATGGACATGTGAACAAAAGCAAAACAAAGCTAATCTTCAGGTTCTTAGAAGCCACTGAAACAGAGCCAACCACAAGAAAAACGTACGGTGCATTGGCTCAAGAACTGCCCATGATCAAGACGTTTGCAGAAGGAATTCTGATCCGAAAAGAATACATTTGGCCAATTGGTCAAGACAAGTATTTGCAGCCTTCAACAACCATTGTGATCGATGCACATAAGCTTGGCTTGGAAGTTTATGCTTCTGGCTTTGCAAATGATGCCATGGTTGGTTACAATTATAGCTATGATCCAATCAGTGAGTACCTTCATTTTATTGATAATGGCGAATTTGCTGTTGATGGTGTGCTTTCTGATTTCGCTCCTGCTGCTTCTAAATCCATTGCCTGCTATTCTAGTTTACACAACAACGGCGAGGCTCAGCCTGGAGTGGAGGAAGCATTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTATCCAGGATCAACTGACCTTGCCTACCAAAAAGCAATTGATGATGGGGCTGACGTTATAGATTGTTCAGTACAATTCTCAAAAGATGGAGTTGCTTTCTGTATGGACATGGCTGATCTTTTGACAAGTACAACTGTAATCACTTCTTTCTCTGCTAAGACTACAACTATCCCTGAAATTCAACCTGAAGCTGGAATCTTCTCCTTTGATCTTACTTGGCCTGAGATTCTAACTGTCAAGCCTCAAATTTCAAACCCTTTCATGGCCTCTTCTGGGCTTGCTCGTAATCCAGCCTTTAAGAACAAGGGCAAGTTTATGACACTTTCTGAGTTTCTGGAGTTTGCTAAAGCCAAGGAGGCTCCTGGGATTATGATCAACCTCCAAAATGCAGCTTACTTGGCTTCGAAGAGAGGCATCGACATGGTGGGAACCGTGTCGACGGCCTTAAGCAACGCGACTTTTGACAAGCAATCAACACAAATGGTTTTCATTAGGTCAGATGACACTTCTGTGTTGTCCATTTTCAAAACCAAGTTTCCAAATTACACAAGAGTGTTAACTGTTGACACCAAGTTTGGGGATGCCCCCAAAGATGTCCTTGAGGAGATCAAACGCTATGCTGAAGTTGTGGCCATTCCTCGTTCCTCTATCATTGAAATAACCAACTCTTTCACAACCGGCTTCACCAAAGTCGTCGCTGAAATGAAGGCTTCCAATCTCTCTGTCTTTGTTTACGTCATGAGGAACGAATACGTTTCCTTGGCGTTTGATTACTACTCCGAAGCTTCCATGGAGATCTCGACCTACGTCGACTACTTCCACGTCGATGGCGTCATCACTGAATTCCCCATTACTGCAAAACGATACATGACATGTCCATGCCGGCCAACTCAACCCGACGCGGAAAAAGCTCCATATGTAATCGTACCAGCTGAGATTGGTTCACTCATGAGTATGGTGGCTGCAGAAGCTAAACCCCCTACTGATCCTCCATTGCCACCATTGGAAGCTGCAGATATCACCGACCCACCGCTCCCGGCAGTGACCAATGTGTCGTCCCTCGCTGCTGCCGCCACTGCCGACGGCCCTCCCGCCACCAACCCATCAACTGCTGTATCAAATGTTGCTAACTTGTTTGTCTCTCTACTCTCAGTTGTTGTGCTCACCTTCTTCGTTTCTCACTCTGCATTGTAA 2331 44.06 MPPFSKIRQCFVLTMLKCLLVIASLILSSAFAQDNVPLKDQWLTLRGQEPLVVARGGLSGVFPESSPFANQLAMVSGLKETVLYCNLQLTKDGIGICLTDLRLQNSTNIEDIFPRANKNYNVNGKIVKGWFSVDYMSEDLFNKVYMIQSILSRPSVYDGTLPLAAVEDVVGIRPHQFWLNAEYEAFYHEHNLSVSTYLQKALRLMRINFVSSSEIGILKGLHGHVNKSKTKLIFRFLEATETEPTTRKTYGALAQELPMIKTFAEGILIRKEYIWPIGQDKYLQPSTTIVIDAHKLGLEVYASGFANDAMVGYNYSYDPISEYLHFIDNGEFAVDGVLSDFAPAASKSIACYSSLHNNGEAQPGVEEALVISSNGASGDYPGSTDLAYQKAIDDGADVIDCSVQFSKDGVAFCMDMADLLTSTTVITSFSAKTTTIPEIQPEAGIFSFDLTWPEILTVKPQISNPFMASSGLARNPAFKNKGKFMTLSEFLEFAKAKEAPGIMINLQNAAYLASKRGIDMVGTVSTALSNATFDKQSTQMVFIRSDDTSVLSIFKTKFPNYTRVLTVDTKFGDAPKDVLEEIKRYAEVVAIPRSSIIEITNSFTTGFTKVVAEMKASNLSVFVYVMRNEYVSLAFDYYSEASMEISTYVDYFHVDGVITEFPITAKRYMTCPCRPTQPDAEKAPYVIVPAEIGSLMSMVAAEAKPPTDPPLPPLEAADITDPPLPAVTNVSSLAAAATADGPPATNPSTAVSNVANLFVSLLSVVVLTFFVSHSAL 776
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 70491422 70495558 - Hsped.04g14850.1 Hepe04g1485 568623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1485 776 Pfam Glycerophosphoryl diester phosphodiesterase family 375 663 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Hepe04g1485 776 CDD GDPD_SHV3_repeat_1 50 348 - -
Hepe04g1485 776 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 366 669 - -
Hepe04g1485 776 SUPERFAMILY PLC-like phosphodiesterases 49 345 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Hepe04g1485 776 Gene3D Phosphatidylinositol (PI) phosphodiesterase 367 670 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Hepe04g1485 776 Gene3D Phosphatidylinositol (PI) phosphodiesterase 48 348 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Hepe04g1485 776 ProSiteProfiles GP-PDE domain profile. 368 669 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Hepe04g1485 776 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 15 764 - GO:0008889(PANTHER)
Hepe04g1485 776 CDD GDPD_SHV3_repeat_2 368 668 - -
Hepe04g1485 776 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 48 348 - -
Hepe04g1485 776 ProSiteProfiles GP-PDE domain profile. 50 349 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Hepe04g1485 776 SUPERFAMILY PLC-like phosphodiesterases 369 669 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1234 Hepe-Chr1:77569017 Hepe04g1485 Hepe-Chr4:70491422 1.43e-189 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1485 - - - 0.0