Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1490 | ATGGCGGGCCGTTCCGACGAAGAAGAACACTCTTGCTCTAACTCCAACAACTCCTTCAAGACAATTGATAGTGCTTTCAGTCAGTTCATTGCCGACGATGATTCTGAAGATTTGGGTTCCGACTTCGTCTTTAAGATCGAACCTAGTTTACTCATTGACCTTCGTTGTTTGAAGATTGGTGAAGTTATTGGCGAAGGTTCATGCTCCATTGTCTTTCAAGGACTGTATGATTATCAGCCTGTTGCAGTGAAAATTATACAGCCAAGCAGAACATCAGCTATAAGTCTTGAAAAGAAGGAGAAGTTTCAGAGAGAGGTTTTGTTGCTCTCGAGAGTGAATCATGAGAACGTTATCCAGTTCATTGGCGCTTCTGTAGAACCGACATTGATGATAATCACTGAGCTTATGAGAGGTGGAACACTCCAGAAGTACTTGTGGAGCATCCGGCCAGAGACCCCAGATATGAAGCTTTCCTTAAGTTTTGCTCTAGATCTATCACGAGTAATGGCATACTTGCATGCAAATGGCATCATTCATCGCGACTTAAAGCCAAGCAATCTACTGCTGACAGAAGACAAACAACGGATTAAGCTGGCTGACTTTGGGTTGGCTAGAGAGGAAATATCTGGCGAAATGACTACTGAGGCTGGTACTTATCGCTGGATGGCCCCTGAGCTATTTAGCATTGATCCATTGCCTGTTGGAGGTAAGAAATTCTATGATCACAAGGCAGATGTCTACAGCTTCTCAATAATTCTTTGGGAGTTGCTGACAAACAAGACTCCATTCAAGGGCAGAAATAATGTAATGGTAGCATATGCCACAGCCAAGAACATAAGACCAAGTCTTGAGGAAATCCCAGAATATCTTGCCCCTCTCTTGCAGTCATGCTGGGCTGAGGATCCCAATGGCCGTCCAGAATTTACACAAGTCATAGATTCTCTATGCAATCTTCTTCAAACTTTTGTCTTAAAAGAATCTTCACTTCCTAACATGGTGGAAACAGAGGAGAAGGTCGAGTACTGTGCATCAGACACATCGTCTTCTCAGAGCAAGAGAGAGCATAATAAGGCCAGAAGACATAGAAACTCTTCATTCTGTCTCAATTGTTGCTACACATTGTGCATGTCTGATTGA | 1137 | 43.1 | MAGRSDEEEHSCSNSNNSFKTIDSAFSQFIADDDSEDLGSDFVFKIEPSLLIDLRCLKIGEVIGEGSCSIVFQGLYDYQPVAVKIIQPSRTSAISLEKKEKFQREVLLLSRVNHENVIQFIGASVEPTLMIITELMRGGTLQKYLWSIRPETPDMKLSLSFALDLSRVMAYLHANGIIHRDLKPSNLLLTEDKQRIKLADFGLAREEISGEMTTEAGTYRWMAPELFSIDPLPVGGKKFYDHKADVYSFSIILWELLTNKTPFKGRNNVMVAYATAKNIRPSLEEIPEYLAPLLQSCWAEDPNGRPEFTQVIDSLCNLLQTFVLKESSLPNMVETEEKVEYCASDTSSSQSKREHNKARRHRNSSFCLNCCYTLCMSD | 378 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 70535241 | 70538441 | + | Hsped.04g14900.1 | Hepe04g1490 | 568628 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1490 | 378 | SMART | serkin_6 | 57 | 322 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g1490 | 378 | CDD | STKc_MAP3K-like | 63 | 315 | - | - | |
Hepe04g1490 | 378 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 137 | - | - | |
Hepe04g1490 | 378 | Pfam | Protein tyrosine and serine/threonine kinase | 57 | 315 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe04g1490 | 378 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 24 | 317 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Hepe04g1490 | 378 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 177 | 189 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe04g1490 | 378 | Gene3D | Transferase(Phosphotransferase) domain 1 | 138 | 367 | - | - | |
Hepe04g1490 | 378 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 330 | IPR011009 | - | |
Hepe04g1490 | 378 | ProSiteProfiles | Protein kinase domain profile. | 57 | 323 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe04g1490 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 171 | 189 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe04g1490 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 286 | 308 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe04g1490 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 244 | 266 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe04g1490 | 378 | PRINTS | Tyrosine kinase catalytic domain signature | 133 | 146 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe04g1490 | Hepe-Chr4:70535241 | Hepe09g0241 | Hepe-Chr9:2088187 | 4.41e-102 | dispersed | |
Hepe04g1490 | Hepe-Chr4:70535241 | Hepe07g0675 | Hepe-Chr7:7855223 | 5.21e-19 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72756 | PF07714 | PK_Tyr_Ser-Thr | 3.30E-53 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1490 | - | - | - | 0.0 |