Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1503 ATGGCGAATATGTGCGCCGATAGCGGCAATCTTATGGCGATTGCTCAGCAAGTCATGAAGCAGAAGCAGCAACAGGAGCAACAGCAGCAGCAGCATCCACAGCAGCCACCGCTGCAGCTCACTGGACCTTGTACTTTCGCTTTAAACCCATGGAGTGGCTCCAACCATGCTCTCTCCGCTGCTCCAGATTTGGGGTTTGGCCTTGCCGGAGCTGGATTTTCCGACCCGTTTCAGGTTCAGAGAGTGGTCGACGGTGGAGAAGCGAGCTTTCAGTTTCCGAACTTGGAGCACCATTCTTCTGCTTTCAGATTTTCAGATTTCGACGGCGGCGCTGCTGCAGATTTCGACTCTGATGAGTGGATGGACAGTCTAATGGCTGGTGGAGATTCAACGGATAGCTCTAATCTTCCTTCTGGTTGCGACGCGTGGCAGTCTAATTCGGATTTCGCTTTCTACGGTGCCGATCCCTTTGTCCCCTGTCCCAGTCGCCTCACTATCCCCTGTTCTTCACCCTCTGATCTTAACAGAGCCATTTTCCCTGACCCGCTTAAAACTCAGACAAACGTTCAACCGCCGGTGGTTTCATGGACCGGGCTTCCGCCGGAGATTCACCCGGCGGTGGTTAAAGACACTCAAGTCGCTAATGTTCCCCTTGCGATATACAAGAGTGAAGATAACGGCGGTTCGTCGAGTTCTGCAGAGACTGAATCGACGCCGCCACTTCTTAAAACCCTAATTGAATGTGCTCGACTTTCTGAATCGGAGCCAGATCGAGCGGCGCAAATGTTGATTCAGCTTAAGGAATCGTCATCGGAGCATGGAGATCCGACGGAGAGGGTCGCTTTTAACTTTCTAGAAGCCCTTTACCGGAGGTTATCTCTGCAATCGGAGAAGATGATTTTGGCTTCTTCCGAATCCACTTCCGATGACTTCACTCTCTCTTACAAAGCTCTCAACGACGCTTGCCCATACTCTAAATTCGCCCATTTGACTGCGAATCAAGCGATTCTCGAAATTACAGAGAACGCGAGCAAGATTCACATAATCGACTTCGGGATCGCTCAGGGAGTTCAATGGGCGGCTCTTCTTCAAGCTCTAGCAACCCGCTCCACCGGAAAACCAAACGGAATTCGGATCTCCGGCATTCCAGCTCCGATGCTCGGGAACTGCCCGGCAACGGCGCTGTTCGCGACGGGTAATCGCCTCGCGGAGTTCGCAAAGCTTCTGGAACTGAACTTCGAATTCGATCCAATTCTGACTCCAATCGAAGAACTGAAGGAATCCTCGTTCCGAATCGACTCCGACGAAACCCTGGCCGTGAATTTCATGCTCCAACTGCACAATCTCTTGGACGAAACTCCTCGCGCCGTTCTCAATGTTCTGCAACTCGCTAAATCGCTGAACCCTAGAATCGTGACGCTCGGGGAGTACGAAGCCAGACTGAACCGGGTCGGGTTCTTAACCCGGTTCAAGAACGCACTCAGATACTACTCGGCCGTGTTCGAATCACTTGACCCGAAATTACCTCGCGACTCAAACGAGAGGCTGCAACTGGAGAAGCTCGTACTCGGGCGGCAGATCGGCGGCCTTGTCGGTCCGGAATCGTCGTCGTTGCCGGGATCGAAAACGGAACGAATGGAAGACAAAGAACAGTGGAAAATGCTAATGGAAAATAGCGGATTTGAACCAGTAAATCTGAGCCATTACGCGAAAAGTCAAGCTAAAATTCTTCTATGGAAGTACGATTACAGCTCCGAGTATTCTTTGATCGAATCCTCACCTGGGTTTCTCTCGTTGGCGTGGAATCAAGTCCCAATCATTACAGTTTCTTCATGGCGTTGA 1842 51.36 MANMCADSGNLMAIAQQVMKQKQQQEQQQQQHPQQPPLQLTGPCTFALNPWSGSNHALSAAPDLGFGLAGAGFSDPFQVQRVVDGGEASFQFPNLEHHSSAFRFSDFDGGAAADFDSDEWMDSLMAGGDSTDSSNLPSGCDAWQSNSDFAFYGADPFVPCPSRLTIPCSSPSDLNRAIFPDPLKTQTNVQPPVVSWTGLPPEIHPAVVKDTQVANVPLAIYKSEDNGGSSSSAETESTPPLLKTLIECARLSESEPDRAAQMLIQLKESSSEHGDPTERVAFNFLEALYRRLSLQSEKMILASSESTSDDFTLSYKALNDACPYSKFAHLTANQAILEITENASKIHIIDFGIAQGVQWAALLQALATRSTGKPNGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDPILTPIEELKESSFRIDSDETLAVNFMLQLHNLLDETPRAVLNVLQLAKSLNPRIVTLGEYEARLNRVGFLTRFKNALRYYSAVFESLDPKLPRDSNERLQLEKLVLGRQIGGLVGPESSSLPGSKTERMEDKEQWKMLMENSGFEPVNLSHYAKSQAKILLWKYDYSSEYSLIESSPGFLSLAWNQVPIITVSSWR 613
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 70630850 70632691 + Hsped.04g15030.1 Hepe04g1503 568641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1503 613 ProSiteProfiles GRAS family profile. 232 613 IPR005202 -
Hepe04g1503 613 Pfam GRAS domain family 242 613 IPR005202 -
Hepe04g1503 613 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 234 612 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Hepe04g1503 613 MobiDBLite consensus disorder prediction 17 45 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1503 Hepe-Chr4:70630850 Hepe10g1981 Hepe-Chr10:56869049 2.98e-52 dispersed
Hepe07g0671 Hepe-Chr7:7768584 Hepe04g1503 Hepe-Chr4:70630850 5.56e-222 transposed
Hepe04g1503 Hepe-Chr4:70630850 Hepe07g0684 Hepe-Chr7:8018653 2.25e-19 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55462 PF03514 GRAS 3.50E-110 CL0063 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1503 - - - 0.0