Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1524 ATGAGAGCGGCGGAGGAGAACTCCCATCGACGGAACAGAGACAGAAGTGAAACAACTTTTTCAGAGCACGGCGGAGGACTTGCCCGCGTTCCGGAATCAAGCGAGGAGCTCCGGCGGCGGCAGCCATTGGTTAAGTCAGCTGAGAGGAAAAGCGGGGAAGTGAAGAAAAAAAATTGCCAAAATTTCAGAATCTGGCTGTCTTTGGCCGGAAAATTTGGAGGAGCACAACGAAATCTTCTCCAATTGGTCACCGGAATTGCCGCCATGGAAGCTCCAGTCAGGGCATTTCGCCCCTACGTTCTTAATCGCCGCCTCTTCTCCAAAACAATTCCTCCATTGCGCCTAATTTCATCTCCCGAATCTAAACAGAGCGCAATTTTCCGGCAATCTTCAACCTATTTTCGCCCCCCTCCTTCTCGAAAGTGCTCCAGTTCCAAAATCTCACTCTCACTCAATCTTCCTCGCTGCTCCTCCTCGCCATTTGGATTTTCTTCCTCTTCTCTTGGCTCTAGCCCTTCTAATTTTCTGTCTTCTGTACCCTCATTACATTCTTTCGGCTCTCAATTCGGGCCCGATCAATTCAATTCGTTCCTATCCGATTCGAACGGCAGTTCCTGGACTTGGAATCGAGCTTCAGAGAGTGCAATTAGGGGAAACGTGGGGGTTTTGGGGGGCGAAAAGGGATCGGCGACCGTCGTGTTGTTAGGTTGGCTCGGATCGAAGACTAAGCATCTGAGGAGGTACGTCGAGTGGTACAATGCTAGGGGTATCAACGCCTTGACGTTTGTGCTTGATCCGAGAGAGTTTCTTTGGTTTGCGTTGAGTCGGAGAGTTGAGCAGCGGATTTCAGATTTGGCGGTGGAACTCATTTCTTGGTTATCAGACGGGGAAGAGAATGATAATGATCGGTCCCTAATTTTTCACACTTTTAGCAATACGGGCTGGTTTGTATACGGAGCCATTCTTGAAATTCTGCAGGGGCGGAAGGATTTGTTGGAGAAGATCAAAGGGTGCATTGTTGATTCTGGAGGAGGTGGTCCATTGAATCCTCAGGTTTGGGCAGCTGGATTTTCTGCAGCCATTCTCAAGAAAAACAGTTCCTCTGCATCTCCTGTGGTTAATGGAGAGGAAATAGACAAGAAACCTCCTTTGATGGAAACCATTGTTCTATCAACATTGGAGAAGTTTTTCTCAGTCGCCTTGAAGTTTGAAGACGTCGATAAGAGATTGAAGAAGATTGTTTCAGAACTTACAGAGAACCAACCTTTGTATCCTGAGCTTTATCTGTATAGTTCAGGAGATAAAGTTGTGCCATTCGAGTCAATCGAGCTGCTTATCGAGAAGAGGAAGAAGACGGGAAGGAAGGTTTTGTCGTACAACTTCGGCTCATCGCCTCATGTTGACCATTACAGGACATACCCTGATATATACTCATCGCAGCTTCACAAGTTCTTGATAGAGTCTTTTTCTTCATAG 1476 47.15 MRAAEENSHRRNRDRSETTFSEHGGGLARVPESSEELRRRQPLVKSAERKSGEVKKKNCQNFRIWLSLAGKFGGAQRNLLQLVTGIAAMEAPVRAFRPYVLNRRLFSKTIPPLRLISSPESKQSAIFRQSSTYFRPPPSRKCSSSKISLSLNLPRCSSSPFGFSSSSLGSSPSNFLSSVPSLHSFGSQFGPDQFNSFLSDSNGSSWTWNRASESAIRGNVGVLGGEKGSATVVLLGWLGSKTKHLRRYVEWYNARGINALTFVLDPREFLWFALSRRVEQRISDLAVELISWLSDGEENDNDRSLIFHTFSNTGWFVYGAILEILQGRKDLLEKIKGCIVDSGGGGPLNPQVWAAGFSAAILKKNSSSASPVVNGEEIDKKPPLMETIVLSTLEKFFSVALKFEDVDKRLKKIVSELTENQPLYPELYLYSSGDKVVPFESIELLIEKRKKTGRKVLSYNFGSSPHVDHYRTYPDIYSSQLHKFLIESFSS 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 70756438 70760454 - Hsped.04g15240.1 Hepe04g1524 568662

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1524 491 Pfam Eukaryotic protein of unknown function (DUF829) 231 485 IPR008547 -
Hepe04g1524 491 MobiDBLite consensus disorder prediction 1 52 - -
Hepe04g1524 491 MobiDBLite consensus disorder prediction 1 20 - -
Hepe04g1524 491 PANTHER UNCHARACTERIZED 173 486 IPR008547 -
Hepe04g1524 491 SUPERFAMILY alpha/beta-Hydrolases 226 485 IPR029058 -
Hepe04g1524 491 MobiDBLite consensus disorder prediction 32 52 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1524 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2456 Hepe-Chr2:70935702 Hepe04g1524 Hepe-Chr4:70756438 1.47e-46 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g992 . . . Bda10g00138 . . . Bma15g00995 . . Cma03g00739 . Car03g00675 . . . Cpe10g00621 Bhi03g01316 . . . Hepe04g1524 . . Cla01g01917 Cam01g2004 Cec04g1661 Cco04g1722 Clacu01g2023 Cmu01g1899 Cre04g1576 . . Cone6ag1634 . Lsi01g00668 . . Cme08g00856 . Blo06g00135 . . . . . . . Cmo03g00768 . . . . . . . . . . . . . . . . . . . . . . Csa06g03249 Chy02g00639 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002433 5 3 5 4 2 1 2 1 2 2 1 1 2 1 2 1 1 3 2 1 2 3 2 2 1 1 1 2 1 4 61