Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1554 ATGGCTAAGCTTGTGAGTTTTGTCTTTGTTCTTTCCCTTCTTGCCTTTGCTCCACTCTGTTTCTGTAGCAGGACTGGTGGCTCTGGGTCTCTATTCCCTCAATATTATGACCATTCCTGCCCCAAAGCTAAGGGCATAGTCAAATCTGTTGTGGCAAAGGCTTTTGCTAGAGAAGCTCGTATTGCTGCTTCTATCATTAGACTTCACTTCCATGACTGTTTTGTTCAGGGATGTGATGCATCTATACTATTGGATAGCGGTGGGAGCATTACGAGCGAAAAGAATTCAAACCCGAATAAGAACTCGGCTAGAGGGTTTGAGGTGATTGATGAGATAAAATCTGCATTGGAGAAGGAGTGCCCAGAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCTACTGCCATTGCAGGTGGACCCTTTTGGGAGGTTCCATTGGGAAGGAAGGACTCAAAAAGTGGGAGTTTGAGTGGCTCCAACAACAACATTCCAGCTCCAAACAACACATTCCAAACCCTTCTCAATAGATTCCAAAACCAACGCCTTGACATTGTTGATCTTGTTGCCTTATCTGGAAGCCACACCATCGGAAATTCAAGGTGCGCCAGCTTCAAGCAGAGACTATACAACCAGAACGGCAACGGACAGCCCGACAAAACCCTTCCGACGTCGTATGCGGCCGAGCTCCGGAACCGCTGCCCGAGGTCCGGCGGCGACAACAACCTCTTTTTCCTAGACATCGTCAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACATAGTCGATAACAAAGGGCTTCTCAACTCCGACCAAGTCCTCCTCACCGGAAACGACATGTCGGCCGATTTGGTAAAGAAATATGCAGAAGACAGCGAGCTGTTCTTCAGGCAATTCGCAAAATCTATGATAAAAATGGGCAATATTTCGCCATTGACAGGCTCAAGTGGAGAGATCAGAAATAATTGCAGGAAGATCAACAATTAG 999 46.65 MAKLVSFVFVLSLLAFAPLCFCSRTGGSGSLFPQYYDHSCPKAKGIVKSVVAKAFAREARIAASIIRLHFHDCFVQGCDASILLDSGGSITSEKNSNPNKNSARGFEVIDEIKSALEKECPETVSCADILALAARDSTAIAGGPFWEVPLGRKDSKSGSLSGSNNNIPAPNNTFQTLLNRFQNQRLDIVDLVALSGSHTIGNSRCASFKQRLYNQNGNGQPDKTLPTSYAAELRNRCPRSGGDNNLFFLDIVSPTKFDNSYFKNIVDNKGLLNSDQVLLTGNDMSADLVKKYAEDSELFFRQFAKSMIKMGNISPLTGSSGEIRNNCRKINN 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 71086778 71089755 + Hsped.04g15540.1 Hepe04g1554 568692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1554 332 PANTHER PEROXIDASE 72-RELATED 10 330 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 CDD secretory_peroxidase 31 330 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe04g1554 332 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Haem peroxidase superfamily signature 62 76 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 SUPERFAMILY Heme-dependent peroxidases 31 331 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Hepe04g1554 332 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601(InterPro)
Hepe04g1554 332 Pfam Peroxidase 47 295 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 FunFam Peroxidase 168 310 - -
Hepe04g1554 332 ProSiteProfiles Plant heme peroxidase family profile. 30 331 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 Gene3D Peroxidase, domain 2 168 311 - -
Hepe04g1554 332 Gene3D - 35 331 - -
Hepe04g1554 332 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 40 59 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 PRINTS Plant peroxidase signature 64 84 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe04g1554 332 FunFam Peroxidase 34 175 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0036 Hepe-Chr3:394458 Hepe04g1554 Hepe-Chr4:71086778 1.16e-94 dispersed
Hepe03g0137 Hepe-Chr3:1655227 Hepe04g1554 Hepe-Chr4:71086778 2.19e-81 dispersed
Hepe04g1554 Hepe-Chr4:71086778 Hepe06g1744 Hepe-Chr6:68520938 4.47e-103 dispersed
Hepe07g2034 Hepe-Chr7:64542245 Hepe04g1554 Hepe-Chr4:71086778 1.52e-58 dispersed
Hepe07g0630 Hepe-Chr7:6951986 Hepe04g1554 Hepe-Chr4:71086778 5.83e-83 transposed
Hepe10g1840 Hepe-Chr10:55130923 Hepe04g1554 Hepe-Chr4:71086778 8.58e-56 transposed
Hepe04g1554 Hepe-Chr4:71086778 Hepe07g0701 Hepe-Chr7:8393147 7.74e-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1554 K00430 - csv:101204648 548.125