Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g1557 | ATGGAGTGGGTTTTGTTGTTAGTGATTGTTTTAGGTTTGGTTTTGTTGATGAGGAAGATGAAGATGAAGATGAAGAATGATATTAGAATTCCAAAAGGAAACCTGGGTTGGCCTCTCTTTGGTGAAACTCTTCAATTCATTGCTTCTGGTTACTCTTCTCGTCCTGTCACCTTCATGGACAAACGAAAATCTCTGTACGGGGACGTGTTTAAAACAAACATATTGGGGACAGCCATCATAGTATCCACTGATTCGGATGTGAATAAGGTGGTTTTACAGAATCATGGGAACATATTTATCCCAGCTTACCCAAAATCAATTACGGAATTACTTGGTACATTTTCAATTCTTCAAATGAATGGAAATGTTCAGAAAAGAGTTCATACAATCATTGGAGCTTTCCTCAGGTCTCCTCAACTCAAAGCCAAAATCACTACAGATATTCAAAACACCGTTAAATTAAGACTTTCCAATTGGAACACCTCCCAATTGGTTTATGTCCAAACCGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTTTTGATGAGTGTGGGACCAGGTGAAGATTTGAAGATTTTGAAAAGGGAATTCGAAGAGTTTATCAAAGGCTTGATTTGTATACCCATTAAACTACCTGGAACAAGGCTATATAAATCTTTGAAGGCCAGAGAGAAGTTGTTGAAAATAGTGAGTAAAATTGTGGAAGAGAGAAAATCGACGGCGGTGGAGAAGGTTGCACCGAGGGATGCGGTGGATGTGCTCTTACAGGATCACGATGAAATTCAAGGGCTGCCGTTGGATTTCATCAGCAGTCACATCTTAGAGCTGATGATTCCCGGCGAGGAGACGGTGCCGATGGCGATGACACTCGCCGTCAAATTTCTCAGTGACACCCCCATCGCTCTAGCCCAAATAATGGAGGAGAATATGGAACTCAAGAAGCAGAAGGATGATTCTGGCCAGGAGTATACGTGGACAGATTACATGTCCCTGCTATTTACTCAAAATGTGATTAGTGAAACGTTAAGAATGGCTAATATCATCAATGGGGTTTGGAGGAAAGCTCAAAAAGATGTGCAAATCAAAGGCTATTTAATACCACAAGGATGGTGTGTTTTGGCATCTTTTATTTCGGTTCATATGGATGAAAATAACTATGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGGTAATTGGATCTGCAACTAACAACCATAACTTTACACCTTTTGGAGGGGGACAAAGGCTATGTCCCGGCATCGAACTCGCTAGGCTAGAAATCTCAATTTTCCTTCATCATCTTGTCACTACCTACAAATGGGGAGCTGAAAAGGATGAAATCATCCATTTTCCGACAGTGCAGATGAGAAGGAAGCTGCCAATCGCAATCGCAACCTTAAGCTCTTGA | 1419 | 41.16 | MEWVLLLVIVLGLVLLMRKMKMKMKNDIRIPKGNLGWPLFGETLQFIASGYSSRPVTFMDKRKSLYGDVFKTNILGTAIIVSTDSDVNKVVLQNHGNIFIPAYPKSITELLGTFSILQMNGNVQKRVHTIIGAFLRSPQLKAKITTDIQNTVKLRLSNWNTSQLVYVQTETKQITFEVLVKVLMSVGPGEDLKILKREFEEFIKGLICIPIKLPGTRLYKSLKAREKLLKIVSKIVEERKSTAVEKVAPRDAVDVLLQDHDEIQGLPLDFISSHILELMIPGEETVPMAMTLAVKFLSDTPIALAQIMEENMELKKQKDDSGQEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPQGWCVLASFISVHMDENNYANPHQFDPWRWEVIGSATNNHNFTPFGGGQRLCPGIELARLEISIFLHHLVTTYKWGAEKDEIIHFPTVQMRRKLPIAIATLSS | 472 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 71104230 | 71109856 | + | Hsped.04g15570.1 | Hepe04g1557 | 568695 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g1557 | 472 | Pfam | Cytochrome P450 | 31 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | Coils | Coil | 304 | 324 | - | - | |
| Hepe04g1557 | 472 | CDD | CYP90-like | 62 | 467 | - | - | |
| Hepe04g1557 | 472 | PRINTS | P450 superfamily signature | 412 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PRINTS | P450 superfamily signature | 136 | 149 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PRINTS | P450 superfamily signature | 338 | 349 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PRINTS | P450 superfamily signature | 421 | 432 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 20 | 470 | - | - | |
| Hepe04g1557 | 472 | Gene3D | Cytochrome P450 | 19 | 470 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | SUPERFAMILY | Cytochrome P450 | 28 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PANTHER | CYTOCHROME P450 26 | 29 | 446 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Hepe04g1557 | 472 | PRINTS | E-class P450 group IV signature | 421 | 439 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PRINTS | E-class P450 group IV signature | 382 | 400 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PRINTS | E-class P450 group IV signature | 333 | 349 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PRINTS | E-class P450 group IV signature | 405 | 421 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | PRINTS | E-class P450 group IV signature | 57 | 80 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1557 | 472 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 414 | 423 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g1478 | Hepe-Chr2:19193017 | Hepe04g1557 | Hepe-Chr4:71104230 | 3.87e-158 | dispersed | |
| Hepe04g1557 | Hepe-Chr4:71104230 | Hepe10g1973 | Hepe-Chr10:56755433 | 4.50e-76 | dispersed | |
| Hepe04g1557 | Hepe-Chr4:71104230 | Hepe03g1471 | Hepe-Chr3:71482274 | 1.01e-178 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g1557 | K12637 | - | csv:101203911 | 776.163 |