Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g1572 | ATGGATTATTCTGTTCTTCAATCTCTGCAAATGCCACTCTTTTTGAGTGTCCCTCTTCTGTTTCTCGTGGGCCTCATCTTAAGGTCGTTCCGGCGAAAACTACCCTATCCACCTGGTCCCAAAGGCCTGCCCTTCATCGGCAACATGCTCATGATGGACCAGCTCACCCACCGTGGACTCGCCAACCTCGCCAAGCGCTACGGCGGAATCCTCCATATGCGCATGGGCTTCCTTCACATGGTCGCCGTCTCCAACCCCGACGTCGCCCGCCAAGTTCTCCAGGTCCATGACAATATTTGTTCTAATCGTCCCGCCACCATCGCCATAAGTTACTTAACCTACGACCGCGCCGACATGGCTTTTGCTCACTACGGCCCTTTTTGGCGGCAGATGCGTAAGCTTTGCGTCATGAAGTTATTCAGCCGCAAGCGAGCCGAGTCATGGGAGTCCGTTCGAGATGAAGTAGACACCACTATCAGAAAGCTCGCCGTCTGTACTAGAACCACCGTGAACGTCGGCGAGCTAGTGTTTGAGCTGACGAGAGATATTATATATAGAGCCGCGTTCGGGACCAGCGCGGTGCAAGGTCAGGATGAGTTCATAAAAATATTGCAGGAATTCTCCAAACTTTTCGGAGCTTTCAATATCGCGGATTTCATACCAAGTCTCGGTTGGATTGACCCTCAAGGCTTGAACAACAGGCTCGTTAAGGCTCGCCAATCGCTTGATAAGTTCATCGACACCATAATCGACGATCACATGGAGAAGAAAACAAAGAGAAAATTATCAAATGTCAAAGATATTGACGAAGTTGACACCGATATGGTGGACGAGTTACTAGCTTTTTACAGTCAAGATACCACACTAAATGAGTCAGATGATCTACAAAATGCCATCAAACTCAGCCGTGACAACATCAAAGCTATCATCATGGACGTTATGTTTGGGGGAACGGAGACGGTAGCGTCGGCAATAGAGTGGGCCATGTCAGAGCTGATGAAAAGTCCAGAAGATTTAAAGAAGGCCCAACAAGAACTAGCCCAAGTCGTCGGTCTGGAACGACGTGTCGAAGAAGCAGACTTCGAGAATTTGACCTTCTTGAAATGCTGCCTCAAGGAGACCCTTCGCCTCCACCCGCCGATCCCGCTCCTCCTCCACGAGACGGCGGAGGACGCGGTGGTCTCCGGCTACTTCATTCCGGCCAAATCGAGGGTCATGATCAACGCGTGGGCCATCGGGAGGGACTCGACTTCCTGGGACGACGCCGAGACATTCCGGCCGGCGAGGTTTCTAAAACAGGGGATGCCGGATTTCAAAGGGAGCAATTTCGAGTTCATTCCGTTCGGGTCGGGACGTCGGTCTTGCCCCGGAATGCAACTGGGTCTGTACGCGCTTGAGATGGCGGTGGCCCAGTTGCTCCACTGTTTCACGTGGGAATTGCCCGACGGGATGAAGCCAACAGAAATGGACATGGCCGACGTTTTCGGGCTGACCGCTCCGAGAGCGACCCGACTTCTCGCTGTGCCCACGAAGCGGGTTCTGTGCCCACTCGTTTGA | 1557 | 52.54 | MDYSVLQSLQMPLFLSVPLLFLVGLILRSFRRKLPYPPGPKGLPFIGNMLMMDQLTHRGLANLAKRYGGILHMRMGFLHMVAVSNPDVARQVLQVHDNICSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWESVRDEVDTTIRKLAVCTRTTVNVGELVFELTRDIIYRAAFGTSAVQGQDEFIKILQEFSKLFGAFNIADFIPSLGWIDPQGLNNRLVKARQSLDKFIDTIIDDHMEKKTKRKLSNVKDIDEVDTDMVDELLAFYSQDTTLNESDDLQNAIKLSRDNIKAIIMDVMFGGTETVASAIEWAMSELMKSPEDLKKAQQELAQVVGLERRVEEADFENLTFLKCCLKETLRLHPPIPLLLHETAEDAVVSGYFIPAKSRVMINAWAIGRDSTSWDDAETFRPARFLKQGMPDFKGSNFEFIPFGSGRRSCPGMQLGLYALEMAVAQLLHCFTWELPDGMKPTEMDMADVFGLTAPRATRLLAVPTKRVLCPLV | 518 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 71225773 | 71228671 | + | Hsped.04g15720.1 | Hepe04g1572 | 568710 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g1572 | 518 | CDD | CYP71-like | 66 | 505 | - | - | |
| Hepe04g1572 | 518 | SUPERFAMILY | Cytochrome P450 | 37 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 305 | 322 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 408 | 432 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 368 | 386 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 64 | 83 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 325 | 351 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | E-class P450 group I signature | 88 | 109 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | FunFam | Cytochrome P450 84A1 | 29 | 511 | - | - | |
| Hepe04g1572 | 518 | PANTHER | CYTOCHROME P450 84A1-RELATED | 10 | 517 | IPR053062 | GO:0004497(PANTHER) | |
| Hepe04g1572 | 518 | PRINTS | P450 superfamily signature | 316 | 333 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | P450 superfamily signature | 369 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | Gene3D | Cytochrome P450 | 27 | 511 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | Pfam | Cytochrome P450 | 37 | 500 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1572 | 518 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g0475 | Hepe-Chr2:4633870 | Hepe04g1572 | Hepe-Chr4:71225773 | 8.10e-244 | dispersed | |
| Hepe04g1572 | Hepe-Chr4:71225773 | Hepe07g0689 | Hepe-Chr7:8143809 | 1.71e-262 | dispersed | |
| Hepe04g1572 | Hepe-Chr4:71225773 | Hepe04g1476 | Hepe-Chr4:70341741 | 1.90e-120 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g1572 | K09755 | - | csv:101205783 | 826.624 |