Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1575 ATGAGGCTTCTTCTTCTCTTATTCTTTCCGCTCTTGCTGCTTCTCTGCGGCGGTTTCTTTTCCTCCTCCGCCGACACCCTAGCGGAGATTCAGGCGTTGATGTCCTTTAAGCTTAACCTTCATGATCCTCTTGGTGCATTGACTGCTTGGGATTCTTCTACTCCTTCGGCTCCATGTGACTGGAGAGGTGTGGTTTGTACCGGTAATCGAGTCACCGAGCTTCGTTTGCCTCGCCTTCAACTCTCCGGCCGATTGACCGATCAGTTGGCTAACTTGCCCATGCTAAGGAAGTTTAGCATTCGCTCCAATTTCTTCAACGGTACGATTCCCTCTTCTCTCTCCAAATGTGCGTTTCTCCGTGCCATTTTCTTGCAGTACAACTCGTTTTCCGGTGCTCTTCCGCCCGAGTTTGGCAACTTCACTAATCTACATATTCTGAATGTTGCGGAGAATCGCCTCTCCGGCGTCATCTCCGGTGACCTTCCGAGAAGCCTCAAGTATCTCGATCTTTCCTCGAACGCATTCTCCGGTCAGATTCCGAGGAGCGTTGTGAACACGACGCAGCTTCAGGTCGTGAATCTCTCTTTTAATAGATTCGGCGGGGAGATTCCGGCGAGTTTTGGTGAGCTTCAGAAGCTTCAACATCTCTGGCTGGACCATAATGTTCTAGAAGGTACTTTGCCTTCGGCTCTTGCGAATTGTTCTTCGCTCGTTCATTTGAGCGTGGAGGGAAATGCGCTCCAAGGCGTAATCCCGGCCGCCATTGGAGCTCTTCCGAATCTTCAAGTGATTTCTCTCTCGCAGAATAGTCTCTCTGGCTCAGTTCCTTTCTCCATGTTTTGCAATGTCTCGACGCATGCGCCGTCGCTTCGAATCGTTCAAATTGGATTTAATGCGTTCACGGACATCGTCAAACCTCAGATAGCGACGTGTTTTAGTGCTCTACAGGTCCTCGATATTCAACACAATCAGATAACGGGAGAGTTCCCCTTCTGGTTAACGGCCGTTTCGACTTTGACACTCTTGGATTTTTCCGTCAACAATTTCTCCGGCCAGATTCCGCCTGAGATTGGGAATCTTTCCGGATTACAAGAGCTCAGAATGACGAACAATTCGTTTCAAGGGACGATTCCGTTAGAAATCAAGAACTGCGCTGCGATTTCTGTCATTGATTTTGAAGGTAACCGCTTAACCGGAGAGATTCCGTCGTTTTTGGGCTATATGAGAGGTTTGAAACGGTTGTCTCTCGGTGGTAATCGTTTTTCCGGCATCATTCCGGCCAGTTTGGGGAATCTTTTGGAACTTGAAATCTTGAATCTAGCCGACAATGGCTTGAATGGAACCCTTCCTCTTGAGCTAATGGGGCTTGGGAATTTAACGTCAATGGAACTCGGTGGGAATGAGTTTTCCGGTGAGGTTCCAATTGGTATTGGGAATCTCAGTCGCCTTGAGATTTTGAATCTTAGTGCCAACGCTCTTTCCGGGAAGATTCCGTCGAGTCTTGGCAATCTCTTCAAGTTAACGACTCTGGATTTGAGCAAACAGAATCTTTCTGGGGAGTTGCCATTTGAGCTATCTGGTTTGCCTAATTTGCAGGTAATTGCTCTACAGAAAAACAAGCTATCTGGGAATGTTCCTGAAGGATTCAGTAGTTTGGTGGGGTTGAGCTATTTGAATCTAAGCTCAAATGGATTCTCTGGTCAAATCCCTTCGAATTATGGGTTCCTTCGATCACTTGTTTCACTGTCATTGTCAAACAATCACATTTCCGGGTCGATCCCTTCAGAGCTGGGGAACTGCTCTGATCTAGAAAGTTTGGAGGTTCGTTCAAATGCACTTTCAGGTCATATTCCGGCGGATCTTTCTCGTTTATCTCATCTGCTAGAGCTCGATTTGGGTTGGAATAATTTGACTGGTGAAATCCCTGAGGAGATCTCTAGTTGCTCGTCTTTAGAATCACTCCTTCTGAACTCGAATCATCTTTCCGGTAGCATACCGGAGTCGTTATCGAAGCTCTTGAACTTAACCACACTCGACCTCTCATCCAACAATTTGAGTGGTGTAATCCCTGCTAATCTTAGCTCAATTACTGGATTGGTGAGCTTAAATGTCTCGAGTAACGATCTAGAAGGCGAAATCCCAGCCGCTTTAGGCTCTAGATTCAACAGCTCATCTGTGTTTGCTAATAATTCTGACTTATGTGGGAAACCATTGGGTAGGAATTGTAAGGATACAGAGAAAAAGGATAAAATGAAGAGATTGATACTATTCATTGTAGTAGCTGCCAGTGGAGCTTGCCTCTTGACTTTGTGTTGCTGCTTCTACATTTTCAGCTTGTTGAGATGGCGGAAGCGGCTCAAAGAGAGAGCGTCGGGGGAGAAGAAAACAAGTCCAGCAAGGGTTAGCTCGGCGGCGAGCGGTGGCCGGGGAAGCTCAGAAAATGGAGGGCCAAAGCTTGTGATGTTCAACAACAAGATTACTCTAGCGGAAACAATCGAGGCAACGAGGCAATTCGATGAAGAAAATGTTCTAAGCAGAACCCGTTATGGATTGGTTTTCAAAGCTTGTTACAATGATGGCATGGTGCTTTCAATCCGCCGTCTCTCAAATGGATCATTGGATGAAAACATGTTCAGGAAAGAAGGTGAAGCATTGGGAAAAATTAGGCACCGAAATCTGACTGTTCTTCGTGGCTACTACGCCGGCCCTCCTGATATGCGGCTATTAGTATACGACTACATGCCTAACGGAAACCTTGCCACTCTCCTTCAGGAAGCATCTCACCAAGATGGTCATGTCCTGAATTGGCCAATGCGCCATCTCATTGCTCTTGGAATCGCCCGTGGCCTAGCCTTTCTCCATTCATCTTCCATTATCCATGGTGATATGAAGCCACAGAGCGTTCTATTCGATGCCGATTTCGAAGCTCATTTGTCGGATTTCGGGTTGGACCGCCTAACCATTGTGGCCTCCGTGGAAGCATCCACATCTACCTTGGTGGGCACTTTGGGTTACATTGCACCAGAAGCAGTGTTGACAGGGGAGGCCACAAAGGAATCTGATGTCTACAGCTTTGGCATTGTGTTGCTTGAGATTCTAACGGGGAAGAAACCAGTAATGTTCACAGAAGATGAAGACATTGTCAAGTGGGTGAAAAAGCAATTGCAGAGAGGCCAAATTACTGAGCTCCTGGAACCAGGCTTGCTTGAGCTGGATCCTGAATCATCAGAATGGGAAGAGTTCTTGCTAGGTGTGAAAGTTGGATTGCTTTGCACCGCGCCGGATCCCCGCGATCGGCCGACCATGTCCGATATCGTTTTCATGCTCGAAGGTTGCCGAGTCGGACCGGACATCCCCTCCTCCGCGGATCCCACCTCCCAACCGTCCCCGGCATAA 3396 47.56 MRLLLLLFFPLLLLLCGGFFSSSADTLAEIQALMSFKLNLHDPLGALTAWDSSTPSAPCDWRGVVCTGNRVTELRLPRLQLSGRLTDQLANLPMLRKFSIRSNFFNGTIPSSLSKCAFLRAIFLQYNSFSGALPPEFGNFTNLHILNVAENRLSGVISGDLPRSLKYLDLSSNAFSGQIPRSVVNTTQLQVVNLSFNRFGGEIPASFGELQKLQHLWLDHNVLEGTLPSALANCSSLVHLSVEGNALQGVIPAAIGALPNLQVISLSQNSLSGSVPFSMFCNVSTHAPSLRIVQIGFNAFTDIVKPQIATCFSALQVLDIQHNQITGEFPFWLTAVSTLTLLDFSVNNFSGQIPPEIGNLSGLQELRMTNNSFQGTIPLEIKNCAAISVIDFEGNRLTGEIPSFLGYMRGLKRLSLGGNRFSGIIPASLGNLLELEILNLADNGLNGTLPLELMGLGNLTSMELGGNEFSGEVPIGIGNLSRLEILNLSANALSGKIPSSLGNLFKLTTLDLSKQNLSGELPFELSGLPNLQVIALQKNKLSGNVPEGFSSLVGLSYLNLSSNGFSGQIPSNYGFLRSLVSLSLSNNHISGSIPSELGNCSDLESLEVRSNALSGHIPADLSRLSHLLELDLGWNNLTGEIPEEISSCSSLESLLLNSNHLSGSIPESLSKLLNLTTLDLSSNNLSGVIPANLSSITGLVSLNVSSNDLEGEIPAALGSRFNSSSVFANNSDLCGKPLGRNCKDTEKKDKMKRLILFIVVAASGACLLTLCCCFYIFSLLRWRKRLKERASGEKKTSPARVSSAASGGRGSSENGGPKLVMFNNKITLAETIEATRQFDEENVLSRTRYGLVFKACYNDGMVLSIRRLSNGSLDENMFRKEGEALGKIRHRNLTVLRGYYAGPPDMRLLVYDYMPNGNLATLLQEASHQDGHVLNWPMRHLIALGIARGLAFLHSSSIIHGDMKPQSVLFDADFEAHLSDFGLDRLTIVASVEASTSTLVGTLGYIAPEAVLTGEATKESDVYSFGIVLLEILTGKKPVMFTEDEDIVKWVKKQLQRGQITELLEPGLLELDPESSEWEEFLLGVKVGLLCTAPDPRDRPTMSDIVFMLEGCRVGPDIPSSADPTSQPSPA 1131
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 71253623 71257318 + Hsped.04g15750.1 Hepe04g1575 568713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1575 1131 SMART LRR_typ_2 480 504 IPR003591 -
Hepe04g1575 1131 SMART LRR_typ_2 528 551 IPR003591 -
Hepe04g1575 1131 SMART LRR_typ_2 672 696 IPR003591 -
Hepe04g1575 1131 SMART LRR_typ_2 210 233 IPR003591 -
Hepe04g1575 1131 SMART LRR_typ_2 258 282 IPR003591 -
Hepe04g1575 1131 SMART LRR_typ_2 624 648 IPR003591 -
Hepe04g1575 1131 SMART LRR_typ_2 576 600 IPR003591 -
Hepe04g1575 1131 SMART LRR_typ_2 408 431 IPR003591 -
Hepe04g1575 1131 Gene3D Ribonuclease Inhibitor 306 387 IPR032675 -
Hepe04g1575 1131 Pfam Leucine Rich Repeat 626 648 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine Rich Repeat 363 384 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine Rich Repeat 164 183 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine Rich Repeat 339 360 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine Rich Repeat 482 504 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine Rich Repeat 578 600 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine Rich Repeat 315 333 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 457 750 IPR052595 -
Hepe04g1575 1131 SUPERFAMILY Protein kinase-like (PK-like) 817 1119 IPR011009 -
Hepe04g1575 1131 Gene3D Ribonuclease Inhibitor 20 79 IPR032675 -
Hepe04g1575 1131 Gene3D Ribonuclease Inhibitor 162 305 IPR032675 -
Hepe04g1575 1131 Gene3D Ribonuclease Inhibitor 456 746 IPR032675 -
Hepe04g1575 1131 Gene3D Ribonuclease Inhibitor 80 161 IPR032675 -
Hepe04g1575 1131 Gene3D Ribonuclease Inhibitor 388 455 IPR032675 -
Hepe04g1575 1131 MobiDBLite consensus disorder prediction 791 818 - -
Hepe04g1575 1131 FunFam Leucine-rich repeat receptor-like protein kinase TDR 284 534 - -
Hepe04g1575 1131 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Hepe04g1575 1131 SUPERFAMILY RNI-like 311 614 - -
Hepe04g1575 1131 Gene3D Transferase(Phosphotransferase) domain 1 914 1117 - -
Hepe04g1575 1131 SUPERFAMILY L domain-like 575 734 - -
Hepe04g1575 1131 Gene3D Phosphorylase Kinase; domain 1 811 913 - -
Hepe04g1575 1131 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 914 1117 - -
Hepe04g1575 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 622 742 - -
Hepe04g1575 1131 Pfam Leucine rich repeat 188 247 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine rich repeat 650 709 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine rich repeat 526 564 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Leucine rich repeat 409 468 IPR001611 GO:0005515(InterPro)
Hepe04g1575 1131 Pfam Protein kinase domain 848 1106 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1575 1131 FunFam LRR receptor-like serine/threonine-protein kinase 550 621 - -
Hepe04g1575 1131 ProSiteProfiles Protein kinase domain profile. 838 1118 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1575 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 185 - -
Hepe04g1575 1131 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 204 283 - -
Hepe04g1575 1131 SUPERFAMILY L domain-like 56 378 - -
Hepe04g1575 1131 FunFam Putative LRR receptor-like serine/threonine-protein kinase 802 913 - -
Hepe04g1575 1131 MobiDBLite consensus disorder prediction 796 810 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1575 Hepe-Chr4:71253623 Hepe04g1153 Hepe-Chr4:66685738 1.90e-50 dispersed
Hepe04g1575 Hepe-Chr4:71253623 Hepe01g1477 Hepe-Chr1:80076338 2.53e-57 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72757 PF00069 Pkinase 6.00E-34 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1575 - - - 0.0