Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe04g1630 | ATGAACTTTCTGAGGGCTTGCTGGCTGCCGTCCTCGGACAACATCGTACACATCCGTTCGGATTCAGCAGGCCGTCATGATGGCCTACTATGGTACAAGGATATTGGACAGCACATGAATGGTGAATTTTCAATGGCTGTCGTCCAAGCCAATAACTTGCTTGAGGATCAAAGCCAGATCGAATCGGGTTCGTTGAGCTTGCTCGAATCCGGGCCATATGGAACCTTTATTGGTGTCTATGATGGTCATGGTGGGCCTGAAGCGTCAAATTACGTATATGATAATCTTTTCCAGCATTTAAAAAGGTTCACCTCAGAACAACAATCAATGTCATCTGATGTGATAAACAAAGCATTTCAAGCTACAGAGGAAGGGTTTATTTCTCTAGTGACTAAACAATGGCAAACCAAACCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAACCTTGGCGATTCCCGTGCTGTGCTGGGAAGGCTCGTTCGGTCGACTGAGGAGGTTATCGCCGTTCAGCTGTCAGCAGAGCATAATGTGAGCATAGAAGCTGTCAGAAGGGAGATGCATTCTATGCACCCAGACGACTCGCATATAGTAGTTTTGAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTTTCCAGATCTATTGGTGATGTGTATCTAAAGAGGGCGGAGTTCAACAAGGAACCCTTGTATACTAAGTTTAGGCTTCGTGAACCGTTCACTCGACCAATATTGAGCTGTGAACCATCAATTTCGGTGTATGAACTTCAACCACATGATCAATTCATCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAATCAGCAGGCTGTGGATATTATTCGAAATCACCCGCATAATGGAAGTGCAAAGAGATTGGTAAAAGCTGCTATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATATTCAGATTTGATGGAAATCGACCGTGGTGTCCGCCGTCATTTTCACGATGACATCACAGTCATAGTTGTATTTCTCGACTCAAATCTCGTGAGCAGAGCAAGCTCGGTCCGAGGCCCAACCATGTCTTTGAGAGGAAGCGGCGTTATCTTACGGACAAAATCTCTACCTTCTTGTGCCACACCTGCAGTACTTTAA | 1170 | 45.73 | MNFLRACWLPSSDNIVHIRSDSAGRHDGLLWYKDIGQHMNGEFSMAVVQANNLLEDQSQIESGSLSLLESGPYGTFIGVYDGHGGPEASNYVYDNLFQHLKRFTSEQQSMSSDVINKAFQATEEGFISLVTKQWQTKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLVRSTEEVIAVQLSAEHNVSIEAVRREMHSMHPDDSHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNKEPLYTKFRLREPFTRPILSCEPSISVYELQPHDQFIIFASDGLWEHLSNQQAVDIIRNHPHNGSAKRLVKAAMQEAAKKREMRYSDLMEIDRGVRRHFHDDITVIVVFLDSNLVSRASSVRGPTMSLRGSGVILRTKSLPSCATPAVL | 389 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 71680648 | 71682342 | + | Hsped.04g16300.1 | Hepe04g1630 | 568768 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe04g1630 | 389 | CDD | PP2Cc | 43 | 350 | IPR001932 | - | |
Hepe04g1630 | 389 | PANTHER | PROTEIN PHOSPHATASE | 36 | 349 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Hepe04g1630 | 389 | Pfam | Protein phosphatase 2C | 75 | 319 | IPR001932 | - | |
Hepe04g1630 | 389 | Gene3D | - | 32 | 360 | IPR036457 | - | |
Hepe04g1630 | 389 | FunFam | Phosphatase 2C family protein | 31 | 360 | - | - | |
Hepe04g1630 | 389 | SUPERFAMILY | PP2C-like | 51 | 351 | IPR036457 | - | |
Hepe04g1630 | 389 | ProSiteProfiles | PPM-type phosphatase domain profile. | 42 | 350 | IPR001932 | - | |
Hepe04g1630 | 389 | SMART | PP2C_4 | 36 | 348 | IPR001932 | - | |
Hepe04g1630 | 389 | ProSitePatterns | PPM-type phosphatase domain signature. | 76 | 84 | IPR000222 | GO:0043169(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0410 | Hepe-Chr2:3911144 | Hepe04g1630 | Hepe-Chr4:71680648 | 2.97e-207 | dispersed | |
Hepe04g1630 | Hepe-Chr4:71680648 | Hepe05g0216 | Hepe-Chr5:2604721 | 1.78e-175 | dispersed | |
Hepe04g1630 | Hepe-Chr4:71680648 | Hepe06g0898 | Hepe-Chr6:56257293 | 8.29e-207 | wgd | |
Hepe04g1630 | Hepe-Chr4:71680648 | Hepe08g0307 | Hepe-Chr8:2764993 | 3.61e-226 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe04g1630 | K01102 | - | csv:101219696 | 706.442 |