Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1630 ATGAACTTTCTGAGGGCTTGCTGGCTGCCGTCCTCGGACAACATCGTACACATCCGTTCGGATTCAGCAGGCCGTCATGATGGCCTACTATGGTACAAGGATATTGGACAGCACATGAATGGTGAATTTTCAATGGCTGTCGTCCAAGCCAATAACTTGCTTGAGGATCAAAGCCAGATCGAATCGGGTTCGTTGAGCTTGCTCGAATCCGGGCCATATGGAACCTTTATTGGTGTCTATGATGGTCATGGTGGGCCTGAAGCGTCAAATTACGTATATGATAATCTTTTCCAGCATTTAAAAAGGTTCACCTCAGAACAACAATCAATGTCATCTGATGTGATAAACAAAGCATTTCAAGCTACAGAGGAAGGGTTTATTTCTCTAGTGACTAAACAATGGCAAACCAAACCCCAAATTGCAGCTGTTGGTTCATGCTGCCTGGTTGGTGTGATCTGTGGTGGCACCCTTTACATAGCCAACCTTGGCGATTCCCGTGCTGTGCTGGGAAGGCTCGTTCGGTCGACTGAGGAGGTTATCGCCGTTCAGCTGTCAGCAGAGCATAATGTGAGCATAGAAGCTGTCAGAAGGGAGATGCATTCTATGCACCCAGACGACTCGCATATAGTAGTTTTGAAGCATAATGTATGGCGAGTAAAGGGCTTAATACAGGTTTCCAGATCTATTGGTGATGTGTATCTAAAGAGGGCGGAGTTCAACAAGGAACCCTTGTATACTAAGTTTAGGCTTCGTGAACCGTTCACTCGACCAATATTGAGCTGTGAACCATCAATTTCGGTGTATGAACTTCAACCACATGATCAATTCATCATATTTGCTTCTGATGGCCTGTGGGAGCACCTTAGCAATCAGCAGGCTGTGGATATTATTCGAAATCACCCGCATAATGGAAGTGCAAAGAGATTGGTAAAAGCTGCTATGCAGGAAGCAGCTAAGAAACGAGAAATGCGATATTCAGATTTGATGGAAATCGACCGTGGTGTCCGCCGTCATTTTCACGATGACATCACAGTCATAGTTGTATTTCTCGACTCAAATCTCGTGAGCAGAGCAAGCTCGGTCCGAGGCCCAACCATGTCTTTGAGAGGAAGCGGCGTTATCTTACGGACAAAATCTCTACCTTCTTGTGCCACACCTGCAGTACTTTAA 1170 45.73 MNFLRACWLPSSDNIVHIRSDSAGRHDGLLWYKDIGQHMNGEFSMAVVQANNLLEDQSQIESGSLSLLESGPYGTFIGVYDGHGGPEASNYVYDNLFQHLKRFTSEQQSMSSDVINKAFQATEEGFISLVTKQWQTKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRLVRSTEEVIAVQLSAEHNVSIEAVRREMHSMHPDDSHIVVLKHNVWRVKGLIQVSRSIGDVYLKRAEFNKEPLYTKFRLREPFTRPILSCEPSISVYELQPHDQFIIFASDGLWEHLSNQQAVDIIRNHPHNGSAKRLVKAAMQEAAKKREMRYSDLMEIDRGVRRHFHDDITVIVVFLDSNLVSRASSVRGPTMSLRGSGVILRTKSLPSCATPAVL 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 71680648 71682342 + Hsped.04g16300.1 Hepe04g1630 568768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1630 389 CDD PP2Cc 43 350 IPR001932 -
Hepe04g1630 389 PANTHER PROTEIN PHOSPHATASE 36 349 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe04g1630 389 Pfam Protein phosphatase 2C 75 319 IPR001932 -
Hepe04g1630 389 Gene3D - 32 360 IPR036457 -
Hepe04g1630 389 FunFam Phosphatase 2C family protein 31 360 - -
Hepe04g1630 389 SUPERFAMILY PP2C-like 51 351 IPR036457 -
Hepe04g1630 389 ProSiteProfiles PPM-type phosphatase domain profile. 42 350 IPR001932 -
Hepe04g1630 389 SMART PP2C_4 36 348 IPR001932 -
Hepe04g1630 389 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0410 Hepe-Chr2:3911144 Hepe04g1630 Hepe-Chr4:71680648 2.97e-207 dispersed
Hepe04g1630 Hepe-Chr4:71680648 Hepe05g0216 Hepe-Chr5:2604721 1.78e-175 dispersed
Hepe04g1630 Hepe-Chr4:71680648 Hepe06g0898 Hepe-Chr6:56257293 8.29e-207 wgd
Hepe04g1630 Hepe-Chr4:71680648 Hepe08g0307 Hepe-Chr8:2764993 3.61e-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1630 K01102 - csv:101219696 706.442