Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1636 ATGGCGGAAAGTTCAGAAGAGGTCTATCTCCATGGCGATCTCGACCTCAAAATCTTCGAGGCCATCCAGTTGCCTAATATGGACATTATATCTGAGCGTTTTCGTCGTTGCTTCACTGCCTGTGGTACTCTCGACTACTCTTCCATTAAATCCGTTACAACCAACTCCCGTTCTGTCGCCGGTGATGGGAAAGTCCACCGCGGCCATGGGAAAATCATCACCAGCGACCCTTATGTCACCGTCCGCGTTCCACAAGCCACCGTCGCTCGGACTCGCGTCTTAAAGAATTCCCAGAATCCCAATTGGAACGAGCATTTCGTTATCCCTCTTGCTCAGAAAATGGCGGAATTGGAATTCCAGGTGAAAGACGACGATGTCTTTGGCGCTGAAGTTATGGGGACGGTCAAATTCCCTGCTCAGCAAATTGCCTCCGGCGAGACAATTAGTGGGTGGTTTCCGGTGCTTGGCTCAAATGGCAAGCCGCCGAAGCCCGGCACTTCACTCCGAATCGAAATGAAGTTCACCTCGGTCGAGAAGAATCCGTTATATCGACACGGTCTTGCCGGAGATCCCGAGCATAAGGGTGTGCGACACACTTATTTTCCTGTCAGGAAAGGGAGCTCCATGAGATTGTACCAGGATGCTCATGTGCCTGATGGGCTGTTGCCGCAGATTGAATTGGATGGAGGGAATGTTTATAGACAAGAGAAATGTTGGGAGGATATTTGCCATGCTATAACAGAGGCTCATCATATGATTTATATTGTCGGATGGTCAGTTTTTCATAAGGTGAAGCTGGTTAGAGAGCCAAGCAGGCCGTTGCCGCGAGGCGGGGATTTGACTCTTGGTGATCTGCTGAAATACAAATCAGAAGAGGGTGTTCGAGTTTTGTTGATGATTTGGGATGATAAGACTTCTCATGATAAGTTCTTCATCAACACGGCAGGATTGATGCAAACACATGACGAGGAAACCAAAAAGTTCTTCAAGCATTCTTCTGTTATCTGTTTGCTCTCACCTCGCTATCCAAGTGGCAAGCTAAGCTATGTGAAACAAAAGGTTGTAGGGACTGTCTTTACACACCATCAGAAGTGTGTTCTTGTTGATACACAGGGATATGGTAATAATAGAAAGATAACTGCATTTCTTGGAGGTCTTGATCTCTGTGATGGTCGTTATGATACACCCGAGCATCGATTGTTCCGTGGCCTTGACACAATATTTAAGGATGATTTTCATAATCCTACAATTCCTCCTGGAACCAATGCTCCAAGGCAACCATGGCATGACTTGCACTGTCGGATTGATGGGCCAGCTGCATATGACTTGCTTTTAAACTTTGAGCAACGTTGGAACAAAGCCACAAGATGGACAGAGTTTGGCCTACGGTGCAAAAGAATTACTCACTGGCACGATGCTTTAATAAAGATAGAGCGCATATCATGGATACAAAGCCCTCACATACCTATCTTAGCAGATGGTTCGATAAAAGTTCCAGAGGATGACCCTAAAGTATATGTTTCGAAGGAAGCAGATCCTGAAAACTGGCATGTTCAGATTTTTCGATCGATTGACTCTGGATCAGTTAAAGGATTTCCGAGCGATGTCCATGTCGCCGAGTCGCAGAACCTTGTATGTGCAAAAAACTTGGCTATAGAGAAAAGCATTGAAATGGCATATATCCAGGCTATCAGATCGGCACAACATTTCATTTATATTGAAAATCAGTATTTTATTGGAGCATCGTATGGATGGCCGGGATATAAAAATGCTGGGGCTGATAATCTCATTCCCATGGAGTTGGCCCTTAAGATTGCAAGCAAAATAAGAGCCAAGGAAAGATTTGTTGTATACATTATTATACCAATGTGGCCCGAGGGAGATCCGAATAGTGGTCCCATGCAAGAGATTCTTTATTGGCAGGGACAAACAATGCAAATGATGTATGACGTTGTTGCAAGTGAACTGAAGTCATCAGAGCAGCCAGATTTGCACCCTCTAGACTATCTAAATTTCTACTGCCTTGGCAATCGAGAAGAAATTCCTGAGAATGGGCCGACCATTGACGATGCAACGGCATCTAATTCACTAAAACATAAACGGTTTATGATCTACGTTCATGCCAAGGGGATGGTAGTAGATGATGAATATGTAATTATTGGGTCTGCAAATATTAACCAAAGATCTATGGCTGGAACAAAGGACACCGAGATAGCTACGGGCGCCTATCAGCCGCATCACACGTGGGTGAAGAATAAGAAACACCCACATGGTCAGATTTACGGGTACAGAATGTCGTTATGGAGTGAGCATCTCGGGAGGCTCGATCCATGTTTTGAGGAGCCAGAAACTTTGGAATGTGTAAGAAGAGTCAATGGGATTGCTGAGGATAACTGGAAGAGATTTGCAGCCGATGAATTCTCGACATTGCAGGGCCACCTTCTCAGGTATCCGGTGCTCGTGGACGGTGACGGGAAAGTCAATCCTCTGCCTGGACATGAAAACTTTCCTGACGTAGGAGGGAAGATAATAGGGGCTCATTCAGCTGCAATTCCTGATGTTCTGACAACATAG 2574 45.42 MAESSEEVYLHGDLDLKIFEAIQLPNMDIISERFRRCFTACGTLDYSSIKSVTTNSRSVAGDGKVHRGHGKIITSDPYVTVRVPQATVARTRVLKNSQNPNWNEHFVIPLAQKMAELEFQVKDDDVFGAEVMGTVKFPAQQIASGETISGWFPVLGSNGKPPKPGTSLRIEMKFTSVEKNPLYRHGLAGDPEHKGVRHTYFPVRKGSSMRLYQDAHVPDGLLPQIELDGGNVYRQEKCWEDICHAITEAHHMIYIVGWSVFHKVKLVREPSRPLPRGGDLTLGDLLKYKSEEGVRVLLMIWDDKTSHDKFFINTAGLMQTHDEETKKFFKHSSVICLLSPRYPSGKLSYVKQKVVGTVFTHHQKCVLVDTQGYGNNRKITAFLGGLDLCDGRYDTPEHRLFRGLDTIFKDDFHNPTIPPGTNAPRQPWHDLHCRIDGPAAYDLLLNFEQRWNKATRWTEFGLRCKRITHWHDALIKIERISWIQSPHIPILADGSIKVPEDDPKVYVSKEADPENWHVQIFRSIDSGSVKGFPSDVHVAESQNLVCAKNLAIEKSIEMAYIQAIRSAQHFIYIENQYFIGASYGWPGYKNAGADNLIPMELALKIASKIRAKERFVVYIIIPMWPEGDPNSGPMQEILYWQGQTMQMMYDVVASELKSSEQPDLHPLDYLNFYCLGNREEIPENGPTIDDATASNSLKHKRFMIYVHAKGMVVDDEYVIIGSANINQRSMAGTKDTEIATGAYQPHHTWVKNKKHPHGQIYGYRMSLWSEHLGRLDPCFEEPETLECVRRVNGIAEDNWKRFAADEFSTLQGHLLRYPVLVDGDGKVNPLPGHENFPDVGGKIIGAHSAAIPDVLTT 857
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 71716067 71723252 + Hsped.04g16360.1 Hepe04g1636 568774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1636 857 SUPERFAMILY Phospholipase D/nuclease 198 461 - -
Hepe04g1636 857 ProSiteProfiles C2 domain profile. 1 152 IPR000008 -
Hepe04g1636 857 PIRSF PLD_plant 1 857 IPR011402 GO:0004630(InterPro)|GO:0005509(InterPro)|GO:0016020(InterPro)|GO:0046470(InterPro)
Hepe04g1636 857 CDD C2_plant_PLD 8 175 - -
Hepe04g1636 857 Gene3D C2 domain 11 183 IPR035892 -
Hepe04g1636 857 Gene3D Endonuclease Chain A 522 748 - -
Hepe04g1636 857 PANTHER PHOSPHOLIPASE D 9 844 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Hepe04g1636 857 Pfam C2 domain 74 153 IPR000008 -
Hepe04g1636 857 Gene3D Endonuclease Chain A 227 467 - -
Hepe04g1636 857 FunFam Phospholipase D delta 229 473 - -
Hepe04g1636 857 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 10 175 IPR035892 -
Hepe04g1636 857 Pfam Phospholipase D C terminal 777 846 IPR024632 -
Hepe04g1636 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 702 729 IPR001736 GO:0003824(InterPro)
Hepe04g1636 857 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 357 392 IPR001736 GO:0003824(InterPro)
Hepe04g1636 857 SUPERFAMILY Phospholipase D/nuclease 554 786 - -
Hepe04g1636 857 SMART pld_4 702 729 IPR001736 GO:0003824(InterPro)
Hepe04g1636 857 SMART pld_4 357 392 IPR001736 GO:0003824(InterPro)
Hepe04g1636 857 SMART C2_3c 13 151 IPR000008 -
Hepe04g1636 857 Pfam Phospholipase D Active site motif 704 729 IPR001736 GO:0003824(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe03g0078 Hepe-Chr3:922707 Hepe04g1636 Hepe-Chr4:71716067 8.88e-44 dispersed
Hepe04g1636 Hepe-Chr4:71716067 Hepe10g0187 Hepe-Chr10:1879061 0.0 dispersed
Hepe04g1636 Hepe-Chr4:71716067 Hepe03g1618 Hepe-Chr3:73083410 1.78e-239 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1636 K01115 - csv:101217251 1628.61