Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1697 ATGGCCTCAATTGCTGGTTCCAAAGCTTCCTCTAATCAGCCACAAAAGACAGCCAATGGTGAAATGGCTAAAGGGAAGGATGCCGGGCCCTTGCCTCCGCAGATTTCGAAGTTAAGTAAACCTGAATCAGTTACTTCTGACCAGTCTAAATCAGTAAAGAGTATCCCGAAGCAGGACATGGAACTATCTTCCGACAAACAGTCAGCAGTATCGAACCAAAATGGATCTGCTAAGTTGCTGACTGAAAAATTTAATTTCAGCATTTCGTCATCTGGTCTGAAACAAACATCAACTGAAGTAGATTCCCCTCACAATGAAGCTAGATGCTCACCTGGAAGCTCACTAGACCAAGAGAAGAAAACATCAGAATATGGAAGTGTAAAGAGCAGTTCCTTTTCTGTCAAAGTAAGTGATGGGACTAGCTGTCTTGCCAAGACCAGTGGAAGTGCCAAGATTAGCGACCACGGTAACTTTGTTGAGAGTGGCAAGAGCAGTATATGTAGAGGGAGCACGAGCAGTGATATAAGTGATGAGAGCTCTTGCAGTAGTTTTAGTAGTAGTATCAGTAAACCTCACAAAGCAAATGATTTGAGATGGGAGGCCATTCAAGTTGTCCGTGCGAAAGATGGGGCGATGGGATTAGGTCATTTTAGACTTCTGAAGAAGTTGGGTTGTGGGGATATTGGGAGTGTCTATCTCTCTGAGTTAAGTGGAACAAAATGCCATTTTGCAATGAAGGTTATGGATAAAAATACTCTAGCGAGTCGTAAAAAATTGCTTCGTGCACAGACAGAAAGAGAAATACTTCAATCTCTTGATCACCCCTTCCTTCCAACGTTATACACCCACTTTGAGACGGAGAAATTCTCATGCTTGGTGATGGAGTTCTGCCCTGGAGGAGACTTGCATACTCTAAGGCAGAGGCAACCAGGGAAGCATTTTCCTGAGCAGGCAGTGAAATTCTACGTAGCAGAGGTTCTTCTTGCACTAGAATACCTGCACATGCTTGGGATTGTGTACCGTGATCTTAAGCCAGAAAATGTCCTTGTCAGGGAAGATGGACACATAATGCTTTCAGATTTTGACCTATCTCTCCGTTGCACTGTTAGTCCGACTCTTGTCAAAAATTTCTCTGCAGAGTCTGAGGTTTTAAGAAAGAACACAGGTTACTGCGTGCAGCCTGCTTGCATTGAGCCTTCCTGCATCCAACCATCTTGTGTAGTTCCTACAACCTGCTTCTCACCTCGCCTCTTTTCTAGTAAGTCGAAGAAGGAACGGAAACCCAAAATTGAAATGGGAAATCAGGTCAGCCCATTGCCAGAGCTCATTGCAGAACCAACCGATGCCCGATCCATGTCTTTCGTTGGAACTCATGAGTACTTGGCACCTGAGATCATCAAGGGTGAAGGCCATGGAAGTGCTGTAGATTGGTGGACTTTTGGAATTTTTCTATACGAGCTACTATTTGGTAAAACTCCTTTTAAGGGGTCTGGAAATCGAGCTACGTTATTCAACATTGTCGGTCAGCCACTTCGGTTTCCAGATGCACCAGTTGTGAGTTTTGCTGCAAAGGATCTCATAAGGGGATTGCTAGTGAAGGAACCACAACACAGATTGGCTTATAAACGTGGAGCAACTGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTGAACTGGGCATTAATACGTTGTGCTACTCCTCCAGAAATCCCAAGGCCCGTCGACATTGAGAGAAGACCACACACAGTAGCATCAACCAGTGAAAAGGCCGCTGCTATTGCAGCAGCTGCAGATAAAAAAGCTTCCGATAATTATCTTGAGTTTGATTTCTTTTAG 1836 44.34 MASIAGSKASSNQPQKTANGEMAKGKDAGPLPPQISKLSKPESVTSDQSKSVKSIPKQDMELSSDKQSAVSNQNGSAKLLTEKFNFSISSSGLKQTSTEVDSPHNEARCSPGSSLDQEKKTSEYGSVKSSSFSVKVSDGTSCLAKTSGSAKISDHGNFVESGKSSICRGSTSSDISDESSCSSFSSSISKPHKANDLRWEAIQVVRAKDGAMGLGHFRLLKKLGCGDIGSVYLSELSGTKCHFAMKVMDKNTLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKNFSAESEVLRKNTGYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKERKPKIEMGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNIVGQPLRFPDAPVVSFAAKDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPRPVDIERRPHTVASTSEKAAAIAAAADKKASDNYLEFDFF 611
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 72109626 72113189 + Hsped.04g16970.1 Hepe04g1697 568835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1697 611 MobiDBLite consensus disorder prediction 1 19 - -
Hepe04g1697 611 Gene3D Phosphorylase Kinase; domain 1 215 300 - -
Hepe04g1697 611 MobiDBLite consensus disorder prediction 1 74 - -
Hepe04g1697 611 FunFam Serine/threonine-protein kinase D6PK-like 215 300 - -
Hepe04g1697 611 FunFam serine/threonine-protein kinase D6PK-like 301 368 - -
Hepe04g1697 611 SUPERFAMILY Protein kinase-like (PK-like) 192 578 IPR011009 -
Hepe04g1697 611 PANTHER FLIPPASE KINASE 1-RELATED 78 586 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe04g1697 611 MobiDBLite consensus disorder prediction 38 74 - -
Hepe04g1697 611 CDD STKc_phototropin_like 216 577 - -
Hepe04g1697 611 Gene3D Transferase(Phosphotransferase) domain 1 301 369 - -
Hepe04g1697 611 FunFam Serine/threonine-protein kinase AGC1-7 447 572 - -
Hepe04g1697 611 Pfam Protein kinase domain 218 371 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1697 611 Pfam Protein kinase domain 451 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1697 611 MobiDBLite consensus disorder prediction 91 122 - -
Hepe04g1697 611 Gene3D Transferase(Phosphotransferase) domain 1 448 572 - -
Hepe04g1697 611 ProSiteProfiles Protein kinase domain profile. 217 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1697 611 SMART serkin_6 217 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1697 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g1777 Hepe-Chr2:25469280 Hepe04g1697 Hepe-Chr4:72109626 7.44e-232 dispersed
Hepe04g0239 Hepe-Chr4:45106611 Hepe04g1697 Hepe-Chr4:72109626 1.07e-183 dispersed
Hepe04g1697 Hepe-Chr4:72109626 Hepe05g2100 Hepe-Chr5:71584084 2.71e-220 dispersed
Hepe02g0334 Hepe-Chr2:3193228 Hepe04g1697 Hepe-Chr4:72109626 2.34e-93 wgd
Hepe04g1697 Hepe-Chr4:72109626 Hepe07g1432 Hepe-Chr7:47620532 2.72e-294 wgd
Hepe04g1697 Hepe-Chr4:72109626 Hepe08g0359 Hepe-Chr8:3219992 5.58e-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72762 PF00069 Pkinase 7.80E-38 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1697 K08286 - csv:101209748 1098.19