Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g1732 | ATGGACGGCGTCGATGGAGGAGAGAGACGGCGGCGGAGTTTGAAGCAACGGCTAGGATTTAAGGTCATGGGCTGTTGTGGGGCTACTTGGGGTTTCCGGCCGTCGACGGTCAGCGTCAACGACGACGAACACACGGAGGGGATGAACACGCAGAGGTCTCCGGAGGAGAGGGAGTTGGATCGGAGTTGCATGAGTCCGTTTTCCGTTTCGTCGCCGGCACCGTCCGGAATGAACTTGGCCACCGCTCTGGCGGCGGAGCGTCGTTTAAGAGCGTCGCCACGTGGAGTGGAGGGGGGTTTTGTGGAATCTAATGACAACGATTTCGATTCACTGGAAGGAATGATGGGAACGGGGACGCCGTTGAGGGTGTCGCTGATGCGGCTGCTGGAAGAAACAGACGGCAGCGGTGGCGGTGGTGGGAAGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCGGGAAATGATACGGTGTGCTGCGTATGTATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGAGAGTTGTGGTTAAATCGAGGATCTTGTCCGCTTTGCAACCGTCCGATCCTGGAGATTCTTGATATATTTTGA | 624 | 55.93 | MDGVDGGERRRRSLKQRLGFKVMGCCGATWGFRPSTVSVNDDEHTEGMNTQRSPEERELDRSCMSPFSVSSPAPSGMNLATALAAERRLRASPRGVEGGFVESNDNDFDSLEGMMGTGTPLRVSLMRLLEETDGSGGGGGKNLGVAEKKREEAGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPILEILDIF | 207 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 72368373 | 72369718 | - | Hsped.04g17320.1 | Hepe04g1732 | 568870 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g1732 | 207 | PANTHER | OS01G0917900 PROTEIN | 8 | 207 | - | - | |
| Hepe04g1732 | 207 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 140 | 207 | IPR013083 | - | |
| Hepe04g1732 | 207 | MobiDBLite | consensus disorder prediction | 45 | 59 | - | - | |
| Hepe04g1732 | 207 | Pfam | Zinc finger, C3HC4 type (RING finger) | 156 | 201 | - | - | |
| Hepe04g1732 | 207 | ProSiteProfiles | Zinc finger RING-type profile. | 159 | 197 | IPR001841 | - | |
| Hepe04g1732 | 207 | MobiDBLite | consensus disorder prediction | 37 | 59 | - | - | |
| Hepe04g1732 | 207 | SUPERFAMILY | RING/U-box | 150 | 204 | - | - | |
| Hepe04g1732 | 207 | SMART | ring_2 | 159 | 196 | IPR001841 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g0075 | Hepe-Chr2:879030 | Hepe04g1732 | Hepe-Chr4:72368373 | 8.22e-37 | dispersed | |
| Hepe04g1732 | Hepe-Chr4:72368373 | Hepe06g1850 | Hepe-Chr6:69611820 | 2.06e-18 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g1732 | - | - | - | 0.0 |