Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1732 ATGGACGGCGTCGATGGAGGAGAGAGACGGCGGCGGAGTTTGAAGCAACGGCTAGGATTTAAGGTCATGGGCTGTTGTGGGGCTACTTGGGGTTTCCGGCCGTCGACGGTCAGCGTCAACGACGACGAACACACGGAGGGGATGAACACGCAGAGGTCTCCGGAGGAGAGGGAGTTGGATCGGAGTTGCATGAGTCCGTTTTCCGTTTCGTCGCCGGCACCGTCCGGAATGAACTTGGCCACCGCTCTGGCGGCGGAGCGTCGTTTAAGAGCGTCGCCACGTGGAGTGGAGGGGGGTTTTGTGGAATCTAATGACAACGATTTCGATTCACTGGAAGGAATGATGGGAACGGGGACGCCGTTGAGGGTGTCGCTGATGCGGCTGCTGGAAGAAACAGACGGCAGCGGTGGCGGTGGTGGGAAGAATTTGGGAGTGGCGGAAAAAAAGAGAGAAGAGGCGGGAAATGATACGGTGTGCTGCGTATGTATGGGGAGGAAAAAGGGCGCGGCATTTATCCCATGTGGGCACACGTTTTGTAGGGTGTGTTCGAGAGAGTTGTGGTTAAATCGAGGATCTTGTCCGCTTTGCAACCGTCCGATCCTGGAGATTCTTGATATATTTTGA 624 55.93 MDGVDGGERRRRSLKQRLGFKVMGCCGATWGFRPSTVSVNDDEHTEGMNTQRSPEERELDRSCMSPFSVSSPAPSGMNLATALAAERRLRASPRGVEGGFVESNDNDFDSLEGMMGTGTPLRVSLMRLLEETDGSGGGGGKNLGVAEKKREEAGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRPILEILDIF 207
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 72368373 72369718 - Hsped.04g17320.1 Hepe04g1732 568870
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1732 207 PANTHER OS01G0917900 PROTEIN 8 207 - -
Hepe04g1732 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 207 IPR013083 -
Hepe04g1732 207 MobiDBLite consensus disorder prediction 45 59 - -
Hepe04g1732 207 Pfam Zinc finger, C3HC4 type (RING finger) 156 201 - -
Hepe04g1732 207 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Hepe04g1732 207 MobiDBLite consensus disorder prediction 37 59 - -
Hepe04g1732 207 SUPERFAMILY RING/U-box 150 204 - -
Hepe04g1732 207 SMART ring_2 159 196 IPR001841 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0075 Hepe-Chr2:879030 Hepe04g1732 Hepe-Chr4:72368373 8.22e-37 dispersed
Hepe04g1732 Hepe-Chr4:72368373 Hepe06g1850 Hepe-Chr6:69611820 2.06e-18 dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1732 - - - 0.0