Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1749 ATGGAGTGGACGAGAGGCCGGATAATTGGCCGTGGCTCCTCCGCCGCTGTCTCCGTCGCCACCGATCTCCGGTCAGGGCAACTGCTGGCGGTTAAATCTGTTGAGTTTGCCCAATCGGATTTTCTTAAGAGGGAACAGAGGATTCTGTCTCAATTGAATTGTCCACATGTTGTAGCTTATAAGGGTTTTGATGTCACGTTGGAAAATGGGAATTTGATGTGTAATCTTTTGATGGAGTTTGTGGGTGGTGGGTCGATTTTGGATGCGATGGCGGCGGCGGGTGGCCGATTAGATGAGGCGACGACGCAATTGTATACTCGAGAGATTTTAAGTGGGCTCGAGTATGTTCATTCTAATGGTGTGGTGCATTGTGACATTAAGTGTTGTAATATTTTGGTCGGTGAAGATGGGATTAAGATTGCGGATTTTGGTTGCGCGCGGCGGGTGGTGGAGGAGGTTTCCGGTGAGAGTAATTTCGCCGGAACGCCGATATTCATGGCGCCGGAGGTGGCGCGTGGAGAAAAACAGGGGTTCGCAGCTGATGTTTGGGCAGTGGGTTGCACAGTGATCCAGATGGTGACCGGGGGAGCTCCGTGGGCGGATGTGTCTGATCCAGTGGCCGCCATTTACAGAATTGGGTCCGGCGATGACTTGCCGGAGATTCCGAGGTTGATGTCGGAGCAGGGGAAGGACTTTTTGCGGCGGTGTTTGATCAGAGACCCAGAACAACGGTGGTCTGTTAGTGAGCTTTTGAAACACCCTTTTGTTCAGGAGCAGAAATCTCGTCCCAAACAGAATTCAAGAACTCCGACGAGTATTTTGGAACAAGGATTATGGGACACGATCAACGATTTGGATGTAGTTCCAAGTCCGATCAGACCAAAAATTTACAGAACGCCATTGCAGAGGATTCAGCAATTGAGCCAAGTGACAAAAATTCAGTCTTTTGGAATACCCAATTGGGAGTGCGAAGAAGATTGGGTAACAGTGAGAAGCAAAGACACAGAAAAAAGCGATTTCGTCTCTGATTCCATGGCAATCGCAACTAATAATGGAGTTAGTGATCAGAATTATATTAGTATTAGTAGAAGCAGTGATTATTGTAGCAAAAAAAGCAGTATGGTTAAGAAGAGGGACTTGCCTATGTCTTCTGTTAGCAACCAGATTGTAACATTCAACACTATTTATTTTTCCAATAATGACAAATTATGCATTATCATTTCTTTGTTTCTTGTCTTCCCACCCAAGGGTTCAGTTTATCTTGCATTTTTAAGATATAATGAAAATATTTTGATTTATCACCTGTCGACCGAAATTAAATTCTTTTGA 1329 45.37 MEWTRGRIIGRGSSAAVSVATDLRSGQLLAVKSVEFAQSDFLKREQRILSQLNCPHVVAYKGFDVTLENGNLMCNLLMEFVGGGSILDAMAAAGGRLDEATTQLYTREILSGLEYVHSNGVVHCDIKCCNILVGEDGIKIADFGCARRVVEEVSGESNFAGTPIFMAPEVARGEKQGFAADVWAVGCTVIQMVTGGAPWADVSDPVAAIYRIGSGDDLPEIPRLMSEQGKDFLRRCLIRDPEQRWSVSELLKHPFVQEQKSRPKQNSRTPTSILEQGLWDTINDLDVVPSPIRPKIYRTPLQRIQQLSQVTKIQSFGIPNWECEEDWVTVRSKDTEKSDFVSDSMAIATNNGVSDQNYISISRSSDYCSKKSSMVKKRDLPMSSVSNQIVTFNTIYFSNNDKLCIIISLFLVFPPKGSVYLAFLRYNENILIYHLSTEIKFF 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 72521792 72523557 + Hsped.04g17490.1 Hepe04g1749 568887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1749 442 SMART serkin_6 3 256 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1749 442 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
Hepe04g1749 442 CDD STKc_MAPKKK 2 256 - -
Hepe04g1749 442 SUPERFAMILY Protein kinase-like (PK-like) 3 300 IPR011009 -
Hepe04g1749 442 ProSiteProfiles Protein kinase domain profile. 3 256 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1749 442 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 257 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe04g1749 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe04g1749 442 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe04g1749 442 Gene3D Transferase(Phosphotransferase) domain 1 2 293 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1749 Hepe-Chr4:72521792 Hepe10g1336 Hepe-Chr10:49487216 3.50e-62 dispersed
Hepe03g1833 Hepe-Chr3:75312640 Hepe04g1749 Hepe-Chr4:72521792 3.99e-39 transposed
Hepe01g1260 Hepe-Chr1:77888707 Hepe04g1749 Hepe-Chr4:72521792 1.38e-94 wgd
Hepe02g0231 Hepe-Chr2:2349997 Hepe04g1749 Hepe-Chr4:72521792 1.11e-103 wgd
Hepe04g1749 Hepe-Chr4:72521792 Hepe07g1495 Hepe-Chr7:50513443 1.23e-17 wgd
Hepe04g1749 Hepe-Chr4:72521792 Hepe08g0454 Hepe-Chr8:3987877 2.59e-105 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72764 PF00069 Pkinase 6.10E-54 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1749 K20716 - csv:101210574 609.372