Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe04g1779 | ATGTTTAACACTGCAACAACAACTATGGAGTTACTGGATGCCCTTCTTCTCCTCTTCGCCTTCCTCTTTCTCTCCTTATGGTGGCGTTACTGGTCCGCCACCGGCGGGGGATCCAAGAATCTCCCCCCGGGACCACCTGGCTGGCCGATCGTCGGCAACTTAATCCAAGTCATCCTCCAGCGTCGTCCATTCATCTTCGTGGCCCGAGATTTACGTGAAAAATACGGCCCCATTTTCACCATGCAAATGGGACAGCGCACGCTCATCATTGTCTCCAGTGCCGAGCTCATTCACGAAGCTCTCGTGCAACGAGGTCCGCTATTCGCCAGCCGCCCCGCCGACTCCCCGATCCGGCTCGTCTTCAGCGTCGGCAAATGCGCCGTCAACTCGGCCGAGTACGGCCCTCTCTGGCGAACCCTCCGGAGGAACTTCGTGACGGAGCTGATAAACCCGGCGAGAATCAAGCAGTGCAGCTGGATAAGGAAGTGGGCCATAGAGAGCCATCTGGGAAGAATGAGGAAAGAGAATGAGGAGAAGGGATTCGTGGAGGTGATGAGCAACTGCCGCCTCTCGGTTTGTAGCATTCTCATTTGCATTTGCTTTGGAGCCAGAATCCCGGAGGAGGACATAAAGGTAATTGAGAGTATATTGAAGGACGTGATGCTGATTACGTTGCCGAAGCTTCCGGATTTCTTGCCGATTCTGACGCCGCTGTTCGGGCGGCAGCTGAAGGAGGCGAAGGAGCTGAGGAGAAAACAGTTGGAGTGTTTGATTCCGTTGATAAGGAAGAGGAGGATGTTTGTGGAGAGGAATGGTGATGACAGCGTGAGGGAGGCTTTGCCGGAGATGGTTAGTCCGATCGGGGCGGCGTATCTTGATTCGCTCTTTGAATTGGAAACGCCGGGAAGAGGGCGGTTGGGGGAGGAGGAGCTTGTCACACTTTGTTCGGAGGTTATTAATGCCGGAACTGATACCAGCGCCACTGCTTGTGAGTGGGCCTTGCTTCATTTGGTACAAGACCAACAGATTCAGGAAAGACTATACAAGGAAATTGTTAGCGTTGTGGGTAAAGATGGTGCGATAACCGAAGGCGACGTAGAGAAAATGCCATATCTAGGAGCTGTGGTCAAAGAGACTTTCCGGCGACACCCACCGAGCCATTTCTTACTATCTCACGCGGCGACAAAAGAGACGGAGCTCGGCGGCTACACGATCCCTGCGGACGCCAGCGTGGAGTTTTACACGGCCCATTTATCTGACGACCCGAACACGTGGGAAGAACCGGGTTCGTTCCGACCGGACAGATTCTTGGAGGGCGACGGCGTTGGCGTGGACGTGACCGGAACGAAAGGCGTGAAGATGGTGCCGTTCGGGGCAGGGCGGCGGATCTGCCCGGCAATGACGTTGGGCACGTTGCATGTGCACATGATGCTGGCAAGAATGGTACATGCATTCAAGTGGGTCCCGGTTCCCGGAGCCCCGCCCGACCCGACCGAGACTTTTGCTTTTACAGTCATTATGAAGAATCCTCTCAAGGCTGTCATATTGGATAGGTCATAG | 1560 | 54.68 | MFNTATTTMELLDALLLLFAFLFLSLWWRYWSATGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFVARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPARIKQCSWIRKWAIESHLGRMRKENEEKGFVEVMSNCRLSVCSILICICFGARIPEEDIKVIESILKDVMLITLPKLPDFLPILTPLFGRQLKEAKELRRKQLECLIPLIRKRRMFVERNGDDSVREALPEMVSPIGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATACEWALLHLVQDQQIQERLYKEIVSVVGKDGAITEGDVEKMPYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLSDDPNTWEEPGSFRPDRFLEGDGVGVDVTGTKGVKMVPFGAGRRICPAMTLGTLHVHMMLARMVHAFKWVPVPGAPPDPTETFAFTVIMKNPLKAVILDRS | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 72690134 | 72692369 | - | Hsped.04g17790.1 | Hepe04g1779 | 568917 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe04g1779 | 519 | CDD | CYP77_89 | 74 | 512 | - | - | |
| Hepe04g1779 | 519 | SUPERFAMILY | Cytochrome P450 | 42 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | Gene3D | Cytochrome P450 | 37 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | Pfam | Cytochrome P450 | 42 | 509 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 373 | 391 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 96 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 464 | 487 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 191 | 209 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 310 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 414 | 438 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 454 | 464 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | E-class P450 group I signature | 330 | 356 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | P450 superfamily signature | 321 | 338 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | P450 superfamily signature | 374 | 385 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | PRINTS | P450 superfamily signature | 455 | 464 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe04g1779 | 519 | FunFam | Cytochrome P450 family protein | 36 | 519 | - | - | |
| Hepe04g1779 | 519 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 457 | 466 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe04g1779 | 519 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 19 | 515 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g2895 | Hepe-Chr2:78031293 | Hepe04g1779 | Hepe-Chr4:72690134 | 4.21e-147 | dispersed | |
| Hepe04g1779 | Hepe-Chr4:72690134 | Hepe08g1111 | Hepe-Chr8:10991559 | 1.74e-111 | dispersed | |
| Hepe04g1779 | Hepe-Chr4:72690134 | Hepe06g0751 | Hepe-Chr6:53886409 | 4.60e-98 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe04g1779 | K21995 | - | csv:101216852 | 962.985 |