Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1863 ATGGCTTGTAATCTCACAGTCCGTACAGTCATCTTCCTTCTCCTTCTCTTCTCCTTCTCAACTCCATCATTTTCAGCTTCAGTTTGCGATTCGCAGCTCCAACAAGGCTGCCATGACAGAGCCGAGTCCTTGAAACTCAAGCTCATCGCAATCGCTTCCATTCTAGTCGCGAGTATGATCGGCGTTTGTCTTCCTCTCTTCTCCCGCTCGGTTCCGATGCTTCAACCGGAGGGAAATCCCTTCGTAATCGTCAAGGCATTCGCCTCCGGCGTCATTCTAGCCACCGGATACATGCACGTCTTGCCGGATTCCTTCAATTGCTTGACGTCCCCCTGTTTGCCGAGGAATCCATGGCGGAAATTCCCTTTCTCAACATTCATCGCAATGATCTCCGCTGTTATGACTCTAATGCTGGACTCGTTTTCGATGAGTCGCTATAGGAAAAGGTTGAAGGAAGAAGAGGATCATCAAGTTGCAGCAGCAGAAGAAGAAGAAGGAATAAAAATCGGTGAGAATTTGGGGAAATTAGAAGAAGGAAAAACCGATTCGCAATTGCTACGAAACCGTGTGGTTGCGCAAATACTAGAAGCGGGGATCGTGGTGCATTCGGTGGTGATAGGGCTTTCAATGGGGGCATCGGAGAATCCCTGCACCATAAGGCCGCTAATCGCGGCTCTGTGCTTTCATCAATTGTTTGAAGGGATGGGATTGGGAGGATGCATTTTACAGGCGGAATACGGGATGAAGATGAAGACGATAATGGTGTTCTTCTTCTCGATTACAACTCCTTTAGGAATTGGATTGGGAATTGGATTGTCGAATGTGTACCGTGAGAATAGTCCCACGGCGCTGATCGTGGTGGGGGTTTTGAATGCGGTGTCTGCAGGGTTGCTGAATTATATGGCGTTGGTTGATTTGTTGGCGTATGATTTCATGGGGCCTAAGTTGCAAGCTAATCTCAAGCTTCATATTTGGGCTTATGTTGCAGTTTTCTTGGGCGCTGGAGGCATGTCTTTGATGGCGAAATGGGCTTAA 1035 48.02 MACNLTVRTVIFLLLLFSFSTPSFSASVCDSQLQQGCHDRAESLKLKLIAIASILVASMIGVCLPLFSRSVPMLQPEGNPFVIVKAFASGVILATGYMHVLPDSFNCLTSPCLPRNPWRKFPFSTFIAMISAVMTLMLDSFSMSRYRKRLKEEEDHQVAAAEEEEGIKIGENLGKLEEGKTDSQLLRNRVVAQILEAGIVVHSVVIGLSMGASENPCTIRPLIAALCFHQLFEGMGLGGCILQAEYGMKMKTIMVFFFSITTPLGIGLGIGLSNVYRENSPTALIVVGVLNAVSAGLLNYMALVDLLAYDFMGPKLQANLKLHIWAYVAVFLGAGGMSLMAKWA 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 73598824 73599858 - Hsped.04g18630.1 Hepe04g1863 569001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1863 344 Pfam ZIP Zinc transporter 44 341 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Hepe04g1863 344 PANTHER ZINC/IRON TRANSPORTER 43 343 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Hepe04g1863 344 NCBIfam ZIP zinc/iron transport family 29 344 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1863 Hepe-Chr4:73598824 Hepe07g1627 Hepe-Chr7:57031987 9.55e-133 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1863 K14709 - csv:101204028 474.167