Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1877 ATGGAGTCGCAGTTGCTCTCACGCGCCACTTCCTTCGCCGGCGGCATTCCCACCCTCCGCAAGTTGCACAGAGAGTCCACCGTCGCCTTCGTCCAGACCAGGCCGATCGCCGAGGGAGCCAACTTGATTTGGGGACGACAGTTGCGCCCGTCTCTTCTTCTCGATAACCTCTCCGCACCGAATCTAGTCTCCACCAAGCGGAAGACGGTTCTCCCTACCTTCGCGGCAGCCTCTTCTTCTCCCGCCGGAGGCAGCGATTCCGCCGGGGACGCCAAGGTTGCTCCGGTGGGATTCTTCGAGAAGAATCCGGCGTTGCTCACCGGATTCTTCTTCTTCATGTGGTATTTCTTGAACGTGATTTTCAATATCCTCAACAAGAAGATCTATAATTACTTTCCCTACCCTTATTTTGTGTCGGTGATCCATTTGTTAGTTGGGGTGGTGTACTGTTTGATAAGCTGGGTTGTGGGTCTTCCTAAGCGAGCACCTATTGACTCAACACTCCTGAAGTTGCTGATCCCTGTAGCTTTCTGTCATGCCCTTGGCCACGTCACTAGCAATGTCTCATTCGCGGCTGTTGCTGTCTCATTCACACACACAGTCAAAGCTCTGGAGCCGTTCTTTAACGCTGCCGCATCTCAATTCATTCTGGGACAATCCATTCCCATTACCCTGTGGCTTTCATTGGCTCCCGTTGTCATTGGTGTGTCAATGGCTTCCTTGACTGAGCTTTCATTCAACTGGCTTGGCTTCATTAGTGCTATGATTTCCAATATCTCCTTTACCTACAGAAGTCTTTATTCAAAGAAAGCCATGACTGACATGGACAGCACCAACGTCTATGCCTACATTTCCATCATTGCTCTGCTTTTCTGCATTCCACCTGCTGTTATTGTGGAGGGACCTCAACTCCTGAAGGTTGGTTTCAGTGATGCCATAGCTAAAGTTGGTCTAACCAAATTCGTGTTAGATCTCTTCTGGGTGGGAATGTTTTATCACCTCTACAATCAGTTAGCAACCAACACCTTGGAGAGGGTGGCACCACTTACCCACGCAGTTGGAAATGTGCTGAAACGTGTATTTGTGATTGGATTCTCCATCATTATCTTTGGTAACAAGATTTCAATACAGACTGGTATTGGAACCAGCATTGCAATTGCAGGAGTCGCACTTTACTCTTACATCAAGGCACAGATGGAAGAAGAGAAACGACGAACAAAGGTGGCTTGA 1230 48.86 MESQLLSRATSFAGGIPTLRKLHRESTVAFVQTRPIAEGANLIWGRQLRPSLLLDNLSAPNLVSTKRKTVLPTFAAASSSPAGGSDSAGDAKVAPVGFFEKNPALLTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLLVGVVYCLISWVVGLPKRAPIDSTLLKLLIPVAFCHALGHVTSNVSFAAVAVSFTHTVKALEPFFNAAASQFILGQSIPITLWLSLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSLYSKKAMTDMDSTNVYAYISIIALLFCIPPAVIVEGPQLLKVGFSDAIAKVGLTKFVLDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISIQTGIGTSIAIAGVALYSYIKAQMEEEKRRTKVA 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 73714964 73718812 - Hsped.04g18770.1 Hepe04g1877 569015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1877 409 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 105 403 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Hepe04g1877 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 320 394 - -
Hepe04g1877 409 PANTHER SOLUTE CARRIER FAMILY 35 103 397 IPR050186 GO:0005794(PANTHER)|GO:0015297(PANTHER)
Hepe04g1877 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 242 - -
Hepe04g1877 409 Pfam Triose-phosphate Transporter family 107 393 IPR004853 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe04g1877 Hepe-Chr4:73714964 Hepe10g1791 Hepe-Chr10:54663444 2.94e-180 dispersed
Hepe04g1877 Hepe-Chr4:73714964 Hepe04g1780 Hepe-Chr4:72701020 5.53e-71 transposed
Hepe04g1877 Hepe-Chr4:73714964 Hepe01g1296 Hepe-Chr1:78162253 6.00e-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1877 K15283 - csv:101220728 727.243