Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1883 ATGGGTGCTCTCATCGATCTCAATACCACTGAAGAAGATGATGCTTCTGCTGCTGGTTCCTCTGCTTCTTCTTCCTCCGCTTCTGCTTTGACCTCTTCCCCTTCCCCTTCTTCTGTTACTTCCTCAATTTGCTTGGAGCTATGGCATGCCTGTGCTGGCCCTCTTACGTCTTTGCCCAAGAAAGGGAGCTTGGTTGTGTATTTTCCGCAGGGTCACTTCGAGCAGATGCAGGAATTTCCCCCTACGGCTTATGATCTCCCTCCCCACATCCTTTGTCGTGTCATTGATGTTCAGCTTCATGCTGAGGCTGGGAGTGACGAGGTTTATGCTCAGGTTTCATTGTTTCCTGAAAACGAGCAAATGGAGCACAAAATGCGGGAAGAGATGAACAATGACAGCGAGGAGGAGGATGTTGAAGGTGGCGAGAAGACCACAACACCCCACATGTTCTGCAAGACCCTTACTGCTTCAGACACCAGTACTCATGGAGGCTTCTCCGTCCCCAGACGTGCAGCTGAGGATTGCTTCCCGCCATTGGATTATAATCAGCAGAGGCCTTCTCAAGAGCTTGTTGCAAAGGATCTCCTTGGGCTAAAATGGAAGTTCAGGCACATATATCGCGGGCAGCCTAGAAGGCATTTACTCACCACTGGATGGAGTGCATTTGTGAACAAGAAAAGGCTTGTTTCCGGTGATGCAGTGCTTTTTCTTAGGGGCAACGATGGGGAATTACGACTGGGAATTCGAAGAGCTGCACAGCTTAAAAGTGGTCCTGCCTTTTCTAATATTTGCAGTCAGCAGCTCAACTCTAGTAGTATCATGGATGTGGTTAATGCTATATCTACCAAAAGTTCCTTTAGCGTATACTACAATCCCAGGGCTACCTCTTCACAGTTTGTCTTGCCTTTTCACAAGTTCTTGAAGAGCACTAACCATTCTTTCTCTGTTGGAATGAGGTTCAGGCTGAGTTTTGAAACCGAAGATGCTGCAGATCGGAGATACACTGGACATATAACTGGAATTGGCGATGTGGATCCTATCAGATGGTCAGGATCAAGGTGGAGGTCCCTCATGGTGAGGTGGGACGACGGCGAAACCAACAGGCATGGCAGGGTTTCCCCGTGGGAGATCGAGCCCTCTGGTTCTGTTTCTGTGTCCAGCAACTTGGTTCCACCTGGCCTGAAAAGAACCAGGATTGGGCTCTCTTCCACAAAACTAGAGTTTCCAATTCCAAATGGGATTGGAGCATCAGACTTTGGGGAATCTTTAAGATTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTAGGTTACAATACTCCCATTGATGGTGATGACAACACTCGTCATCCCCCTGAAAAGAGGAGATTGTTTCCTGGTTTACATGGTTCTGGGATATCTCTGATGAGAAATAGTCCAAGAAACCCACTTATCAACTCTGAAACTTCCTCCCGGGGTATCGTGTTTGATGATTCCTTCCAATTCCATAAGGTCTTGCAAGGTCAAGAAATATTTCCAAGTCCTTTTTATGGTAGGGCCATGACCACCAATGAAGTTAAGGCAAGTGGTGGCTGCGGTCCTATCGATGGTGTTCGATTGTCTCGGTCTAAAGATGGATGGCCCATGACAATGCAGTGTGAAAATTTCTTCACACGCTCTTCCATTCCTTCTGTGCAAGTCTCATCACCATCTTCTGTATTCATGTTTCAGCAGTCAATGGTTCCTGTTCAAAGCTTTAATTCACACAACCGTGGCAATTTGGCAGAACAGAGGATTGTGAACAGAAGTACATCCCATAATTCTGGGACAGCATTTATGACCGGTCATGGATCGATTCCCGAAGTCGTCCCACAAGGCATGCGTCCCACTTCATTGGGCGAGCAGAATCAGCTCGGCCTATCACATCCTTCTTCAACAGCATCAGCGTTTACAGGCAGTAAAGATATGTCTTCAACTTGCAAAGCTGGCTGTAGATTGTTTGGTTTTTCATTGACAGAGGAAAAGAATGTTGGGAATACAGACAGGGCTTCTCCAGCAACCACCCCAATTAATGCAGGAACAACCACTGTTTTGTCCAATATTGGAGTACAATGTCCTTTGAATTCTCCACTGATGAGCAAGGTGGTTGGAAGCAACTGTACCAAATTTTTGAGCATCAAGAGAAGGAAATCTCTCACCCAGGCTATCGACAATATCAAATCGGAATTGATGCTTTTGGGATTCGTATCGCTGTTGTTGACGGCCACTGAGAAACTTATTGCTAACATTTGCATCCCAAAGTCTTTCAATCACAAATTTCTACCCTGCCAGACCATCAATTCCACTTTTTTCAATGAAGAACCCAACTGTGCTTCACAGGGCAAAGCTTCGTTGCTGTCCAGAGATGGCGCAAAGCAAGTTAAGTATTTGATCATTTCTTTAGCCTTTCTTCACATCCTCTCCACTCTTCTCACCTACACTCTTGGAATCGCCAAGATGAGCCGATGGCAGTCTTGGGAAGCAAAAACCAGAACGTTGGAATATCAATTTACAACTGATCCAAGAAGATTTCAGTTTGCTCGACAAACATCGTTTGGAAAGAGACATCTCAAATTCTGGAGCGACCATCACATTCTTCGATGGCCGGCCTGTTTTCTTAGACAATTTTATGAATCAGTCTCCGCCGCCGATTATCTCACTCTTAGACATGGTTTCATTGCGGCCCATCTTGCAGAAGGAAGCAACTTTGACTTCCAAAACTACATAACAAGAGCTCTAGATAACGATTTCAGTGTTGTTGTGGGAATCAGTTGGTGGGTTTGGATCTTTTCAGTTATCTTCATATTCTTCAGTGCAGATGGATTTCGCAGCCATCTATGGCTTCCCTTTATTCCATTATTAATGCTTTTGTTGGTTGGGACAAAGCTACAAGGCATCATGACAGAGATGTGCTTAGACAGCCACGAGAAGTCCAATGTCGTACGAGGAACTTTGCTTGTTAGGCCCAGTGACCATTATTTTTGGTTGGGTCGCCCCAAGTTGCTTCTCTATTTCATACACTTCATTTTCTTCCAGAATTCTTTTCAATTAGCCTTCTTTTCATGGGCGTGGCTGAAATTTGGGTTGAGATCTTGCTTTCACAGAGAAATTGCAGATTTGGTAATAGGAGTTGTGGTGGGTGTGATGGTGCAGTTCATTTGTGGTTATGTCACTCTCCCTCTCTACGCACTTGTTGCTCAGATGGGGAGTTCGATGAAGAAAACTGTATTCACAGAGGGGGTGGTTGAAGGTCTAAGGAAATGGAAACGGAGAGCCAAGAAAAGGGTTGCTCGAAGGCAAGGAGGCCGCCATGGCTGCACCCACTACAACAACTACTCCCAGTCGCCGCCTTCTTTTAGACTTGATAGTGGTCGTTTACAATGGGCAGCGGCTGATGAACCCAAACCACCACTTGCAACCGGATCAGAAGGTAATACAGAGAGGGGGCGAAGGGCGAAGGGGAAGGAAAAGAAACAATCTCGTCAGCGTTGGACCTGGATTCCGGCCGCCACCGAGGCATCCTCCTCCGCTGGGGCGCCCGCGACTGTCGAAACAATGGTGTCGAAGAACGCCGTCGTGGTTCTCGCGAGGCGTGGCTGTTGTATGAGCCATGTTTTGAAACTGCTGTTGTTGGGCCACGGTGTGAACCCGGCTGTCTTCGCCGTCGGTGAGGAGGATGAAGTCGAAATAGCCGGCGAGATTGGGAAATTGGCCGCCGATGACGGGAGAGTGCAGTTTCCGGTGGTGTTTGTCGGCGGGAAGATGTTTGGTGGGTTGGAAAAAGTGATGGCGGCTCATATTTCCGGCGAATTGGTGCCGGCGTTAAAGGATGCCGGTGCTTTGTGGCTTTGA 3867 47.09 MGALIDLNTTEEDDASAAGSSASSSSASALTSSPSPSSVTSSICLELWHACAGPLTSLPKKGSLVVYFPQGHFEQMQEFPPTAYDLPPHILCRVIDVQLHAEAGSDEVYAQVSLFPENEQMEHKMREEMNNDSEEEDVEGGEKTTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRRHLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGPAFSNICSQQLNSSSIMDVVNAISTKSSFSVYYNPRATSSQFVLPFHKFLKSTNHSFSVGMRFRLSFETEDAADRRYTGHITGIGDVDPIRWSGSRWRSLMVRWDDGETNRHGRVSPWEIEPSGSVSVSSNLVPPGLKRTRIGLSSTKLEFPIPNGIGASDFGESLRFQKVLQGQEILGYNTPIDGDDNTRHPPEKRRLFPGLHGSGISLMRNSPRNPLINSETSSRGIVFDDSFQFHKVLQGQEIFPSPFYGRAMTTNEVKASGGCGPIDGVRLSRSKDGWPMTMQCENFFTRSSIPSVQVSSPSSVFMFQQSMVPVQSFNSHNRGNLAEQRIVNRSTSHNSGTAFMTGHGSIPEVVPQGMRPTSLGEQNQLGLSHPSSTASAFTGSKDMSSTCKAGCRLFGFSLTEEKNVGNTDRASPATTPINAGTTTVLSNIGVQCPLNSPLMSKVVGSNCTKFLSIKRRKSLTQAIDNIKSELMLLGFVSLLLTATEKLIANICIPKSFNHKFLPCQTINSTFFNEEPNCASQGKASLLSRDGAKQVKYLIISLAFLHILSTLLTYTLGIAKMSRWQSWEAKTRTLEYQFTTDPRRFQFARQTSFGKRHLKFWSDHHILRWPACFLRQFYESVSAADYLTLRHGFIAAHLAEGSNFDFQNYITRALDNDFSVVVGISWWVWIFSVIFIFFSADGFRSHLWLPFIPLLMLLLVGTKLQGIMTEMCLDSHEKSNVVRGTLLVRPSDHYFWLGRPKLLLYFIHFIFFQNSFQLAFFSWAWLKFGLRSCFHREIADLVIGVVVGVMVQFICGYVTLPLYALVAQMGSSMKKTVFTEGVVEGLRKWKRRAKKRVARRQGGRHGCTHYNNYSQSPPSFRLDSGRLQWAAADEPKPPLATGSEGNTERGRRAKGKEKKQSRQRWTWIPAATEASSSAGAPATVETMVSKNAVVVLARRGCCMSHVLKLLLLGHGVNPAVFAVGEEDEVEIAGEIGKLAADDGRVQFPVVFVGGKMFGGLEKVMAAHISGELVPALKDAGALWL 1288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 73763442 73781257 - Hsped.04g18830.1 Hepe04g1883 569021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1883 1288 MobiDBLite consensus disorder prediction 1137 1168 - -
Hepe04g1883 1288 NCBIfam glutaredoxin-like family 1188 1288 IPR011905 -
Hepe04g1883 1288 Gene3D - 148 252 IPR015300 -
Hepe04g1883 1288 Pfam Auxin response factor 276 357 IPR010525 GO:0003677(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Hepe04g1883 1288 SUPERFAMILY Thioredoxin-like 1187 1287 IPR036249 -
Hepe04g1883 1288 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 42 691 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Hepe04g1883 1288 Pfam Mlo family 711 1109 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Hepe04g1883 1288 Pfam B3 DNA binding domain 150 251 IPR003340 GO:0003677(InterPro)
Hepe04g1883 1288 CDD B3_DNA 148 250 IPR003340 GO:0003677(InterPro)
Hepe04g1883 1288 SUPERFAMILY DNA-binding pseudobarrel domain 145 261 IPR015300 -
Hepe04g1883 1288 Gene3D Glutaredoxin 1179 1287 - -
Hepe04g1883 1288 Pfam Glutaredoxin 1197 1260 IPR002109 -
Hepe04g1883 1288 ProSiteProfiles B3 DNA-binding domain profile. 150 252 IPR003340 GO:0003677(InterPro)
Hepe04g1883 1288 MobiDBLite consensus disorder prediction 626 646 - -
Hepe04g1883 1288 MobiDBLite consensus disorder prediction 1103 1124 - -
Hepe04g1883 1288 ProSiteProfiles Glutaredoxin domain profile. 1185 1287 - -
Hepe04g1883 1288 Gene3D - 313 387 - -
Hepe04g1883 1288 SMART B3_2 150 252 IPR003340 GO:0003677(InterPro)
Hepe04g1883 1288 MobiDBLite consensus disorder prediction 13 35 - -
Hepe04g1883 1288 MobiDBLite consensus disorder prediction 1 35 - -
Hepe04g1883 1288 FunFam Auxin response factor 313 384 - -
Hepe04g1883 1288 FunFam Auxin response factor 148 252 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g0336 Hepe-Chr1:51198964 Hepe04g1883 Hepe-Chr4:73763442 1.21e-27 dispersed
Hepe04g1883 Hepe-Chr4:73763442 Hepe08g0874 Hepe-Chr8:7925941 2.34e-143 dispersed
Hepe04g1883 Hepe-Chr4:73763442 Hepe08g0426 Hepe-Chr8:3772485 1.03e-32 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55501 PF03094 Mlo 5.90E-139 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1883 K14486 - csv:101220018 1255.35