Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe04g1885 ATGGCACTTCAAGAGGGATTTAACGTGAATGGTGGACACCACGAACCAAACTTCCCTCTAGTTGATCAATGCAAGAACTCCCCTTCAGGAGTTCATGGTATGGCTATGAATAACTTGGAAGGACCTACACATTTGGACTGTCATCAGTTTGATTTACATCAAGGCATTGAGCACAACTTTTACTCTTTCCTTAATGGTAGAAGTTTGTGTGGGGAGGGTGCAATTCCTCATGTTTCTAGCTACTGTCCCAGCATATGTCCTCCACCTGCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGATTGCCCACGTCCTGCCCAAGGGTTGGATTGGTGTGAGGACTACTGTAGCAGTTTCCATGCTGCCTTAGCGTTGAATGAAGGCCCTCCTGGAATGGGTCCAGTTTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTGCTTTTTGCTGCTCTTAGTGCAAAGGCGCAAGGAAAAGATGTTGGTGTCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAGCTTTTTGATCTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCTGATTACAGTGGACGTGGTTGGCATGAGTCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTATGAGTGGCATCTTTATGAATATGAAATTAATAAGTATGATGCCTGCGCTTTGTATAGATTGGAGCTGAAACTTGTCGATGGGAAAAAAGGTTCTAAGGCAAAGGTAACAAATGATTCAGTCGCTGATTTACAGAGGCAAATGGGGAGACTGACTGCTGAATTTCCTGATAATAAACGCTTTGCGAAGGGGAGGACCAAGATTAGCACAAAAGTTGGTGTTGGAAATGTTTACCCTTCAGCAAATAGAGTCATGCCACCCAATGGAACATATGACTATATGCTTCATGCACAATATGATTACCTTGTGGAGAATTTGAGCGAATATTACCTTACATAG 1089 44.35 MALQEGFNVNGGHHEPNFPLVDQCKNSPSGVHGMAMNNLEGPTHLDCHQFDLHQGIEHNFYSFLNGRSLCGEGAIPHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGLDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGVPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHYEWHLYEYEINKYDACALYRLELKLVDGKKGSKAKVTNDSVADLQRQMGRLTAEFPDNKRFAKGRTKISTKVGVGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 73802703 73806751 + Hsped.04g18850.1 Hepe04g1885 569023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe04g1885 362 PANTHER TRANSCRIPTION FACTOR VOZ1 8 360 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(InterPro)|GO:0048578(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe08g0429 Hepe-Chr8:3793001 Hepe04g1885 Hepe-Chr4:73802703 1.41e-63 transposed
Hepe04g1885 Hepe-Chr4:73802703 Hepe08g0428 Hepe-Chr8:3791082 4.90e-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
55502 None None None None Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe04g1885 - - - 0.0